Hymenobacter nivis: DDQ68_13810
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Entry
DDQ68_13810 CDS
T05498
Name
(GenBank) bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
hnv
Hymenobacter nivis
Pathway
hnv00300
Lysine biosynthesis
hnv00470
D-Amino acid metabolism
hnv00550
Peptidoglycan biosynthesis
hnv01100
Metabolic pathways
hnv01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
hnv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DDQ68_13810
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DDQ68_13810
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DDQ68_13810
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
DDQ68_13810
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hnv01011
]
DDQ68_13810
Enzymes [BR:
hnv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
DDQ68_13810
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
DDQ68_13810
Peptidoglycan biosynthesis and degradation proteins [BR:
hnv01011
]
Precursor biosynthesis
Amino acid ligase
DDQ68_13810
Racemase
DDQ68_13810
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase
DUF6301
Motif
Other DBs
NCBI-ProteinID:
AWM33768
UniProt:
A0A2Z3GKN8
LinkDB
All DBs
Position
complement(3118331..3120940)
Genome browser
AA seq
869 aa
AA seq
DB search
MLFADLPVLLGGHLLQAAAEPAAAVRHLVLDSRRAGPPAEALFVALRGPNHDGHRYLPQA
YAQGVRLFVVAENAALPGGLAAYPGAGFVAVASPLGALQALAAAHRRQFAGPVWAITGSN
GKTIVKEWLAQLLGPDEVICRSPRSYNSQVGVPLSVWELSPERHTLGLFEAGISEMDEMA
KLAAIIQPTEGVFTTLGTAHDAGFASEAEKLREKLRLFEGPQFRRLYYCADQGPVREAVA
ALALPGFGWTRHDAPGAALRFRVAPAGPGRTAVRARAGTLGPRADFVLPFADEPSVENAL
HGLAVLLARGVAPAEIQRRLARLQPVAMRLEMKQGRHDSYLLDDTYNNDLAGLALALAAL
GRQARPGRRTLILSDVLESGLTGPALYARVGALLPAHGVTRLVGIGPEISSQLSVINEQL
TDANERLIVNNEPTENRPLITDNYSLLTEFYPSTEAFLAQLNPADFAHETILVKGARRFG
FERIVVALQAQQHGTVLEVNLDALSHNLQHFRQQLRPGTKLMVMVKAFAYGAGSYEVASL
LEFQRADYLAVAYADEGIALREAGIGLPIMVMNPSSDAFELLRRHRLEPEIYSFELLHEY
LATFLATFPATDAPIPSFTNPPIHIKLDTGMRRLGFEEADVPALGALLRQHRARLPVAGI
MTHLAAADDPAHDDFTRQQLAAFGRMAGALEEALGRPVLKHALNSAGIRRFPEAQLDMVR
LGIGLYGVDASGLDANALRPVSTLRTTISQIKTLPAGATVGYGRRGTATAAARRIATLAI
GYADGYDRRFSSGAGVVLVHGQRAPVVGSVAMDMCMVDVTDIPAARAGDVAVVFGAELPL
PMLAARIGTIAYELLTNVSERVKRVFVTE
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
ttgcttttcgctgatctgccggtcctgctgggcggccacctgttgcaggccgccgctgag
ccggccgctgccgtgcgccacctggtgctcgatagccgccgcgccggaccgcccgccgag
gccctgttcgtcgccctgcgggggcccaaccacgacggccaccgctacctgccgcaggcc
tacgcccagggtgtgcgcctgtttgtggtagcggagaacgccgcgctgcccggcggcctg
gcggcgtacccgggggcggggttcgtggcggtggccagtccgttgggagccctgcaagcg
ctggccgcggcgcaccgccggcagtttgcggggcccgtgtgggccatcacgggctcgaat
ggcaagaccatcgtgaaggagtggctagcccagcttttgggccccgacgaggtgatttgc
cgctcgccgcgctcctacaattcgcaggtgggcgtgccgctgagcgtgtgggagttaagt
cctgagcgccacacgctgggcctgtttgaggccggtatttcggaaatggacgaaatggcg
aaactggccgccatcatccagcccaccgagggcgtgtttaccaccctcggcacggcccac
gacgccggctttgcctccgaagccgagaagctgcgcgagaagctgcggctgtttgagggc
ccccagttccggcgcctctactactgcgccgaccagggccctgtgcgcgaagccgtggcc
gccctggccttgcccggcttcggctggacgcgccacgatgcgcccggtgcggccctgcgc
ttccgggtggcgccggccggcccgggccgcaccgccgtgagggcgcgcgccggcacgctg
gggccccgggccgatttcgtgttgcccttcgccgacgagccctccgtcgaaaacgccctg
cacgggctggccgtgctgctggcccgcggcgtagccccggccgaaatccagcgccgcctg
gcccgcctccagcccgtggccatgcgcctcgaaatgaagcagggccgccacgactcgtac
ctgctcgacgacacctataataacgacctcgccggcctggccctggccctggccgcgctc
ggccgccaggcccgccccggccgccgtaccctcatcctcagcgacgtgctcgaatcaggc
ctgacgggccccgcgctctacgcccgcgtgggggccctgctgcccgcccatggcgtgacg
cgcctggtgggcatcggcccggagatttctagtcagttatcagttatcaatgagcagtta
acagatgctaatgagcggttaatagtgaataatgagccaactgagaaccggccgttgata
actgataactactcactgttaactgaattctaccccagcaccgaggccttcctggcccag
ctcaacccggccgattttgcccacgaaaccattctggtgaagggcgcgcgccgcttcggc
ttcgagcgcattgtggtggcgttgcaggcgcagcagcacggcacggtgctcgaagtgaac
ctcgacgcgctgagccacaacctccagcacttccgccagcagctgcggccgggcaccaag
ctgatggtgatggtcaaggcctttgcctacggcgcgggctcttacgaagtggccagcctg
ctcgaatttcagcgggccgactacctggccgtggcctacgccgacgagggcattgccctg
cgcgaggccggcatcggcctgcccatcatggtgatgaacccgtcttccgacgcctttgag
ctgctgcgccgccaccgcctggagccggaaatctactccttcgagctgctccacgagtac
ctggccaccttcctggccaccttcccggccaccgacgcaccgattccctccttcaccaac
ccaccgattcatatcaagctcgacaccggcatgcgccgcctgggcttcgaggaggccgat
gtgccggcgctgggggccctgctgcgccagcaccgcgcccgcctgccggtggccggcatt
atgacgcacctggccgcggccgacgaccccgcccacgacgattttacccgccagcagctg
gccgcgttcggccgcatggcgggggccctggaggaagccctgggccgccccgtgctgaag
cacgccctgaactcggccggcatccggcgtttcccagaggcgcagctcgacatggtgcgg
ctcggtattggcctctacggcgtggacgccagcggcctggacgccaatgccctgcgcccg
gtgagtacgctgcgcaccaccatctcgcaaatcaaaactctgccggccggggccaccgtg
ggctatggccgccggggcacggctaccgcggccgcgcggcgcattgccaccctggccatc
ggctacgccgacggctacgaccgacgcttcagcagcggggcgggcgtggtgctggtgcac
gggcaacgtgcgccggtggtgggctcggtggcgatggatatgtgcatggtggacgtgact
gatatccccgcggcgcgggctggcgacgtggccgtggtattcggcgcggagctgccgctg
ccgatgctggcggcccgcatcggcaccattgcctacgagctgctcaccaacgtgagcgag
cgggtgaaacgggtgttcgtaacggaataa
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