Hymenobacter nivis: DDQ68_15225
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Entry
DDQ68_15225 CDS
T05498
Name
(GenBank) hydrophobe/amphiphile efflux-1 family RND transporter
KO
K18138
multidrug efflux pump
Organism
hnv
Hymenobacter nivis
Pathway
hnv01501
beta-Lactam resistance
hnv01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hnv00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DDQ68_15225
01503 Cationic antimicrobial peptide (CAMP) resistance
DDQ68_15225
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hnv02000
]
DDQ68_15225
01504 Antimicrobial resistance genes [BR:
hnv01504
]
DDQ68_15225
Transporters [BR:
hnv02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
DDQ68_15225
Antimicrobial resistance genes [BR:
hnv01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DDQ68_15225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Patched
Motif
Other DBs
NCBI-ProteinID:
AWM34020
UniProt:
A0A2Z3GZ23
LinkDB
All DBs
Position
3430427..3433618
Genome browser
AA seq
1063 aa
AA seq
DB search
MFDIFIRRPILSLVISVFLVLLGGLALFTLPITQFPDIVPPSVIVTAKYTGANAEVCAKA
VATPLERAINGVPGMTYMSSVSSNNGVTLITIFFEVGTDPDLAAVGVQNRVTTILDELPE
EVIKAGVTTEKEVNSMLLYLNITSDDKDVGEKFIYNFADINVLQELKRINGVGFAEIMGS
REYSMRVWLKPDRMMAYEVGTDEVVQAIRAQNVEAAPGKAGESSGAGQAQAMQYVLRYTG
KLFEPDQYRNIVIRANPDGSVLRLKEVADIEFGSLTYGMSSKTDGQPSAAIMLKQRPGSN
ASEVIAGVKARMAELQKSNFPPGMKYSIAYDVSRFLDASIHEVLRTLLEAFILVFVVVYL
FLQDFRSTLIPALAVPVALIGALFFMKLFGFSINLLTLFALVLAIGIVVDDAIVVVEAVH
ANMQTKHLPPRAATFAAMHEISSSLIAITLVMASVFIPVSFMDGPVGVFYRQFSLTLAIA
IVISGVNALTLTPALCALLLRHDASEAGQGKGLKARFFGAFNRKFEALTNRYEHLLGRTV
MRRALTLGVLAAFAAGTWGVSRVLPSGFIPTEDQGMIYVNVTTPAGATVERTEAVMAQVQ
RIAQKLGPVESVSTLAGYSLISEVAGSSYGMAMINLKPWDQRKQSVPELIQELEAKTKGI
ADADIQFLPPPTVPGFGNSSGFELRLLDKSGTGDLQKTAAASKTFLAALDKSPAISGAFT
GFDPNFPQYLIHVDQDMAAKKGVTVDQAMSTLQTLLGSYYASNFIRFGQMYKVMVQAGPQ
YRSRPDDLLALHVKNNRGELVPFSTFVRLERVFGPDQLTRYNMYNSAMITGDAAPGYSSG
QAIEAIKAVAAKTLPKGFTYEWSGMTREQILSGDQALYVFGIVLIFVYLLLAAQYESLLL
PLPVLLSLPTGIFGAFLALKLLGLENNIYAQVALVMLIGLLGKNAILIIEFAEQRRRAGA
TVVEAAIQGAVARLRPILMTSFAFISGLIPLVIASGAGALGNRSIGTAAAGGMLLGTVFG
LVLIPGLYVLFASFEKVKNLDSNEDDEVPVPTEPAATPELVAH
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatattttcattcgccggcccatcttgtcgctggttatctctgtgtttctggtg
ctgctgggcgggctggcgctgtttacgctgcccatcacgcagtttccggacattgtgccg
ccctcggtgattgtgacggccaagtacacgggcgccaacgccgaggtgtgcgccaaggcc
gtggccacgcccctggagcgcgccatcaacggcgtgcccggcatgacctatatgtcgtcg
gtgagcagcaacaacggcgtgacgctcatcacgatattcttcgaagtgggcaccgacccc
gacctggcggccgtgggcgtgcaaaaccgcgtgacgaccattctggacgagctgcccgag
gaggttatcaaggccggcgtgacgacggagaaggaggtaaactcgatgctgctctacctc
aacatcacgagtgatgacaaggatgtgggcgagaagtttatctataacttcgccgatatc
aacgtattgcaggagctaaagcgcatcaacggcgtgggctttgccgagattatgggctcg
cgcgagtactcgatgcgtgtctggctcaagcccgaccgcatgatggcctacgaggtgggc
accgacgaggtagtgcaggccattcgggcccagaacgtggaggcggcccctggcaaggcg
ggcgaaagctcgggcgcgggccaggcccaggccatgcagtacgtgctgcgctacacgggc
aagctgtttgagcccgaccagtaccgcaacatcgtgattcgagccaaccccgacggctcg
gtgctgcgccttaaagaggtggctgatattgagttcggttcgcttacctacggcatgtcg
tcgaaaaccgacgggcagccctcggcggctattatgctgaagcagcggccgggctccaac
gccagcgaggtaattgcgggcgtaaaagcccgcatggccgagctgcaaaaaagcaacttc
ccgcccggcatgaagtacagcatcgcctacgatgtgtcgcgctttctcgatgccagcatt
cacgaggtgctgcgcacgctgctggaggcttttatattggtatttgtggtggtgtacctg
tttttacaggatttccgctccacgctcattccggcgctggccgtgccggtggccctcatt
ggggcgctgttttttatgaagctcttcggcttcagcatcaacctgctcacgctcttcgcg
ctggtgctggccatcggcatcgtggtcgatgacgccattgtggtggtggaggccgtgcac
gccaacatgcaaaccaagcacctgccaccgcgggcggccacgtttgcggcgatgcacgaa
atcagtagctcgctgattgccattaccttagttatggcgtcggtgttcattccggtctcg
tttatggacgggccggtgggtgtgttctaccggcagttttcgctcacgctggccattgcc
atcgttatttcgggggtcaatgccttgacgctcacgccggccctttgcgcgctactgctg
cgccacgatgccagcgaggcgggccagggcaaggggctgaaggcgcgcttttttggagcc
ttcaaccgaaagtttgaggcccttaccaaccgctacgagcacctgctgggccgcaccgtg
atgcggcgcgcgctcacgctgggcgtactggcggccttcgcggcgggcacctggggcgtg
agccgggtgctgccctcgggctttatcccgaccgaggaccagggcatgatttacgtgaac
gtgacgacccccgccggggctaccgtggagcgcaccgaggccgtaatggcccaggtgcag
cgcattgcccagaaactgggccccgtagagtcggtgtcgacgctggccggctacagcctc
atcagtgaggtggcgggcagcagctacggcatggccatgattaacctcaagccctgggac
cagcgcaagcagtcggtacccgagctgattcaggagctggaagccaagaccaagggcatt
gccgatgccgacattcagtttctgcccccgcccacggtgccgggcttcggcaacagcagc
ggcttcgagctgcgcctgctcgacaagtcgggcaccggcgacttgcagaagactgccgcg
gcctccaaaacctttctggcggcgctggataaatcgccggccatcagcggggctttcacg
ggcttcgaccccaactttccgcagtacctcattcacgtggaccaggacatggccgccaaa
aagggcgtgaccgtggaccaggccatgagcaccctgcaaacgctgctgggcagctactac
gccagcaacttcatccgctttgggcagatgtacaaggtgatggtgcaggccggcccgcag
taccgcagccggcccgacgacctgctggccctgcacgtgaaaaacaaccgcggcgagctg
gtaccgttctcgactttcgtgcgcctggagcgcgtgtttggccccgaccagctcacgcgc
tacaacatgtacaactcggccatgataaccggcgatgcggcccccggctatagctcgggc
caggctatcgaggccattaaggcggtagccgccaagacattgcccaagggcttcacctac
gagtggagcggcatgacgcgcgagcaaatcctgagcggcgaccaggcactgtacgtgttc
ggcatcgtgctgatattcgtttacttgctgctggccgcgcagtacgaaagcctgctgctg
ccgctgcctgtgctgctgagcctgcccaccggcatcttcggggccttcctggcactaaag
ctgttgggcctggaaaacaacatttacgcgcaggtggcgctggtcatgctcatcggcctg
ctgggcaaaaacgccattctcatcatcgagtttgccgagcagcgccgccgcgccggggcc
accgtggtggaggccgccattcagggggccgtagcccgcctgcggcccattctgatgacc
tcgtttgccttcatctcggggctcattccgctggttatcgccagtggggccggcgccctg
ggtaaccgctctattggcacggcggcggcgggcggcatgctgctgggcacggtgttcggc
ctggtgcttattccgggcctctacgtgctgtttgccagcttcgagaaggtaaaaaacctg
gactcgaatgaggacgacgaagtgccagtgcccacagagccggcggcaacgccggagctg
gtggcgcattaa
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