Hemiscyllium ocellatum (epaulette shark): 132817075
Help
Entry
132817075 CDS
T09720
Symbol
scn1laa
Name
(RefSeq) sodium channel, voltage-gated, type I-like, alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hoc04040
]
132817075 (scn1laa)
Ion channels [BR:
hoc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
132817075 (scn1laa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
132817075
NCBI-ProteinID:
XP_060683155
LinkDB
All DBs
Position
7:complement(49628218..49788185)
Genome browser
AA seq
2003 aa
AA seq
DB search
MAQPLLAPPGPDSLRLFTRESLANIERCIAEEKAKKPKDQHGDDDENGPKPNRDLEAGKT
LPYIYGDIPPGMVSEPMEDLDPFYSTQKTFIVLNKGKAIFRFSATPALYILSPFNPLRKL
AIKILVHSLFSMLIMCTIMTNCVFMTLYNPPDWTKNVEYTFTGIYTFESLIKILARGFCI
DHFTFLRDPWNWLDFSVILMAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLKHKCVRWPPPDSYFIPANRSLSLNDTM
TNETEFIFNYEEYIEDDRNQYFLKDAKDALLCGNGSDAGQCPTGYVCLKAGRNPNYGYTS
FDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLVNLILAVVAM
AYDEQNQATLEEAEQKEAEFQQMLEQLKRHQEEAQAAAAAAEAGDENGRIGLCEMSHSSS
DASKLSSKSAKERRNRRKKRRQIELDAEEKDKDERIHKSESEDNGRKGNGFRFSIDRNCL
SYEKKNSSPHQSLLSIRGSIFSPRRNSRSSIFSFKGRTKDVGSENDFADDEHSTFEDNES
RRGSLFIPRRQGERRSSNISQTSRSSRMLPVFPVNGKMHSTVDCNGVVSLAGGPSTPTSP
IGRLLPEVIIDKPATDDNGTNTETDLKKRRSGSHQFSMDFLEDPMQRQRALSVASILTNT
MEELEESRQKCPPCWYKFANTFLIWDCHPNWLKIKEIVHLIVMDPFVDLAITICIVLNTA
FMAMEHYPMTKSFEDVLTYGNLVFTGIFTGEMIFKIIALHPYYYFQEGWNIFDGIIVSLS
LMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFI
FAVVGMQLFGKNYKECVCKIDKDCVLPRWHMSDFFHSFLIVFRVLCGEWIETMWDCMEVS
GQSLCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDSEMNNLQIAVGRIQKGI
DYVKRNMRELIHRVFIRRKVTEDIKPLDDLHSKKDIYISDHAAVEITKDIDYHKDGNCTT
SGIGSSVGKYNNDENDYMSFIHNPNLTVTVPIAVGESDFENLNTEDFTSESDLEGSKEKL
AESSSSEGSTVDRTPPGEGEQPEEIPEESMEPEACFTEGCVQKFPYCYVNIQEGRGKSWW
NLRKTCYRIVEHNWFETFIIFMILLSSGALAFEDIYIEQKHNVKSMLEYADKIFTYIFIL
EMLLKWVAYGFVKYFTNAWCWLDFLIVDVSLVSLVANTLGYSELGAIKSLRTLRALRPLR
ALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGRYYHCINVTDGKQF
SIKIVDNESDCEQLNETARWKNVKINFDNVGAGYLALLQVATFKGWTDIMYAAVDSRGVK
QQPDYEHSLYMYFYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYY
NAMKKLGSKKPQKPIPRPLNKIQGMVFDFVTQQAFDITIMILICLNMVTMMVETDNQSTK
MDDVLYWINMVFIVLFTSECVLKLIALRYYYFTIGWNTFDFVVVILSIVGMFLAEIIEKY
FVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFG
MSNFAYVKKESGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPTKDNP
GSPIKGDCGNPSVAILFFVSYIIISFLIVINMYIAIILENFSVATEESAEPLSEDDFEMF
YEVWEKFDSDATQFMEYSRLHDFADALEPPLRVAKPNRIQLIAMDLPMVSGDRIHCLDIL
FAFTKRVLGEGGEMDALRQQMEERFMASNPSKISYEPITTTLRRKQEHVSATIIQRAFRR
YLIRRTLKQASFMFKEKGKTSELLPGKEEMVIDKFNEISTTDKTDMTPSTTSPPSYDSVT
KPEKAREEKEKEDRGKDVRDYKK
NT seq
6012 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagccactgcttgcaccaccaggaccagatagcctccgcctttttacccgagaa
tctcttgcaaatattgagagatgcattgcagaggaaaaagccaagaaacccaaggaccaa
catggggatgacgatgaaaatggcccaaaaccaaatcgtgatttggaagccggtaaaacg
ttaccatatatttatggtgacatacctccagggatggtgtctgagccaatggaagacctg
gacccattttacagcacacaaaaaacctttatagtattgaacaaagggaaggcaatcttc
cgatttagtgccacacctgccttgtacattttaagtcctttcaatccattaaggaaatta
gctattaagattttggtacattcattgttcagcatgcttatcatgtgcactattatgacc
aattgtgtgtttatgaccctgtataatcctccagactggacgaagaatgtagagtacacc
ttcactggtatttacacatttgaatcgcttataaaaattcttgcaaggggcttctgtata
gatcatttcacttttctccgtgatccatggaactggctggatttcagtgtcatccttatg
gcgtatgtaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcagagta
ttgagagctttgaaaactatttctgtaataccaggcctcaaaaccatcgtgggtgctctg
atccagtcagtgaagaagttgtccgatgtaatgattctgactgttttttgtttgagcgtg
tttgcactaatagggctgcaactattcatgggaaacctaaaacataaatgtgtgcgatgg
ccaccacctgacagctatttcattccagctaacagatctttaagcctgaatgatacgatg
acaaatgagacagaattcatattcaactatgaagaatacattgaagatgatcgaaatcaa
tattttctgaaagatgccaaagatgcccttttatgtggtaatggctcagatgctggtcaa
tgccctacaggttatgtatgtctgaaagctggaagaaaccctaattatggttatactagc
tttgatacatttagctgggcattcttgtcattgtttcgcctgatgacccaggacttctgg
gaaaacctttatcagttgaccctgcgagctgctggcaaaacatacatgatattctttgtg
ctggttatattcctgggatctttctacttggttaacttgattctggctgttgttgccatg
gcctatgatgaacaaaaccaagctactttagaggaagctgaacagaaagaggcagaattt
cagcaaatgcttgaacaacttaaaagacatcaagaagaagcacaggctgcagccgctgca
gctgaggcaggagatgaaaatggaagaattggactctgtgaaatgtcccacagttcctca
gatgcgtcaaagcttagttcaaagagtgccaaggagagacgaaacagaaggaagaaacgg
agacaaatcgaactggatgctgaggaaaaggataaagatgaaaggattcacaagtcagaa
tcagaggacaatggaagaaagggaaatggtttccggttttctattgatcgcaattgtctt
tcttatgaaaagaaaaattcctccccacatcagtcactactaagtatccgtggatccatc
ttttctccaagacgcaacagcagaagcagcatcttcagttttaaaggacggactaaagat
gtagggtcagaaaatgattttgctgatgatgaacacagcacttttgaagacaatgaaagc
agaaggggctccctctttattccacggaggcagggtgagcgacgcagcagtaacattagt
cagaccagtaggtcatccaggatgctaccagtgtttccagtgaatgggaagatgcacagc
acagtggactgcaatggagtggtttcacttgccggtggtccttcaactccaacatcaccc
attggacgacttctgccagaggtgataatagataagccagctactgatgacaatggcact
aatacggaaacagatcttaagaagaggcgatcaggatctcatcaattttctatggatttt
ctggaagatcctatgcagagacagagagcattaagtgtggccagtattctcacgaatact
atggaagaacttgaagaatctcgacagaagtgtcctccatgctggtataaatttgcaaac
accttcttgatctgggattgccatccaaactggctaaaaataaaggaaattgttcattta
attgtaatggacccatttgtggatctcgctattactatctgcattgtgctgaacactgct
tttatggcaatggagcattatccaatgacaaagagctttgaggatgtactcacatatggg
aatttggtatttactggtatttttactggtgaaatgattttcaaaatcatagcactgcat
ccttattattacttccaagaagggtggaatatttttgatggcatcattgtgagtctcagt
ctaatggaacttggtctcgctaatgtggaaggactatctgtgctgcgatctttccgattg
ctcagagtttttaaattggcaaagtcatggccaaccctgaacatgctgattaaaattatt
ggcaactcagtaggtgctttgggcaacttgactttggtgttggccatcattgtcttcatc
tttgctgtggtgggcatgcaactcttcggtaaaaactacaaggaatgtgtgtgtaaaatt
gacaaggactgtgtactgcctcgctggcacatgagcgacttctttcattcctttctaatt
gtgttccgagtgttgtgtggagaatggattgagacaatgtgggactgcatggaagtatct
ggacaatctctgtgcctcattgtcttcatgatggtcatggtaattggtaatctcgtggta
ttgaatttatttttggctttgctactgagctcattcagtgctgacaaccttgctgctaca
gatgatgacagtgaaatgaataacctacagattgctgtggggaggatacagaaaggcatt
gattatgttaaaagaaatatgcgagaattaattcatagagtttttatcaggaggaaagtc
acagaagacatcaaacctcttgatgatttgcatagcaagaaagacatttatatctcagat
catgcagctgttgaaatcactaaagacattgactatcataaggatggaaattgcaccacc
agtggaattggcagtagtgtggggaaatacaataatgatgaaaatgactatatgtccttt
attcacaatccaaacctcactgttactgttccaatagctgtgggggagtcagactttgaa
aacctaaacacagaagacttcactagtgaatcagacctagaaggtagcaaagagaaactg
gctgaaagcagttcatcagaagggagcacagttgacaggactccacctggagagggagag
caaccagaagaaataccagaagaatctatggaacctgaagcatgctttactgaaggatgt
gtacaaaaattcccatactgctatgtcaacatacaagaaggcagaggtaaatcatggtgg
aacctccggaagacttgctacagaatagtagaacacaattggtttgaaacattcattatt
ttcatgattcttctcagcagcggtgccctggcatttgaagatatttacattgaacaaaaa
cacaacgtcaagtcaatgctggaatatgctgataaaatcttcacctacatctttattctg
gaaatgctgctgaagtgggtggcctatggttttgtgaagtatttcacaaatgcttggtgt
tggctggatttcctcattgttgatgtgtctctggtgagccttgtagctaataccctgggc
tactcagaactaggtgctattaagtcccttaggacactgagagctttgagacctcttagg
gccttgtcacgttttgaaggcatgagggtcgtcgtcaatgcacttcttggagcaattcca
tccattatgaatgtgctacttgtctgcctgatattctggctcattttcagtataatgggt
gtaaatctttttgctggaagatactaccactgtatcaatgtaactgatggaaaacagttc
tccatcaagattgttgacaatgaaagtgattgtgagcagcttaatgaaaccgcacgatgg
aaaaatgtaaaaatcaactttgataatgttggggctggctaccttgctttactacaagtg
gcaacatttaaaggatggacggacatcatgtatgcagctgttgattcaagaggtgtgaag
cagcagcctgactatgaacacagtctgtacatgtacttttattttgtcatcttcatcatc
tttggatctttcttcactctaaatctgtttattggtgttatcattgacaacttcaatcaa
cagaagaaaaagtttggaggtcaagatattttcatgactgaagaacagaagaaatattac
aatgccatgaaaaaacttggctccaagaaaccacagaaaccaataccaaggcccttgaac
aagattcaaggaatggtgtttgattttgtaacccagcaagcctttgatatcaccatcatg
attctcatctgccttaacatggttaccatgatggtggagacagataatcaaagtacaaag
atggatgatgtcttatattggatcaacatggttttcattgtccttttcacaagcgagtgt
gtgctgaaactgattgcactccgctattattactttacaattggctggaatacttttgac
tttgtggtggtcattctttctattgtaggcatgttcttagctgaaatcattgaaaaatac
tttgtgtcaccaacgttatttagagttatccgacttgccagaattggtcgcatcctccgt
ttaatcaagggtgctaaggggatccgtacactgctgtttgcattgatgatgtctcttcct
gctttgttcaacattggtctgttgttattcttagtcatgttcatttatgccatttttggg
atgtctaattttgcttatgtgaagaaggagtctggcattgatgacatgttcaactttgaa
acttttgggaacagcatgatctgcctgtttcagatcaccacatctgctggctgggatggg
ttactggctccgattttaaatagtgggccaccagactgtgacccaacaaaggataatcca
ggcagccccataaagggagattgtggtaatccatcagtagcaattttattctttgtaagt
tacatcataatatctttcttgattgtcataaatatgtatattgctattattctggagaat
ttcagtgttgctacagaggaaagtgctgaaccactgagtgaggatgactttgaaatgttt
tatgaagtatgggaaaaatttgattcagatgcaactcaatttatggagtatagtagattg
catgattttgcagatgccttggaaccacctcttcgtgttgcaaaacccaacagaatacaa
cttatagctatggacttgcccatggttagtggagatagaattcactgtcttgatattttg
tttgcatttacaaagcgtgtgcttggtgagggtggagaaatggatgctcttcgacaacag
atggaagaacgctttatggcatccaatccctccaagatatcctatgagccaattacaacc
actttgcgacgtaaacaggaacatgtttctgcaactataattcagagagctttcagacga
tatctaattaggcgaacattgaaacaagcctctttcatgttcaaagaaaaaggtaaaaca
agtgagctactacctggcaaagaagaaatggtaatagataagtttaatgaaatttccact
acagacaaaactgatatgactccttctaccacatctccaccatcctatgacagtgtaaca
aaaccagagaaagcaagagaggagaaagagaaagaagatagaggcaaagatgtaagggac
tataaaaagtaa
DBGET
integrated database retrieval system
