Hemiscyllium ocellatum (epaulette shark): 132824741
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Entry
132824741 CDS
T09720
Name
(RefSeq) mRNA-decapping enzyme 1B-like isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132824741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132824741
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132824741
mRNA degradation factors
5'-3' decay
Decapping complex
132824741
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
DUF1589
IL23
Motif
Other DBs
NCBI-GeneID:
132824741
NCBI-ProteinID:
XP_060695405
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Position
19:45278760..45371841
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AA seq
612 aa
AA seq
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MAAVSGSRGLDISLAALQRQDPYIFRIVDVASQVALYTFSQRDNEWEKTDVEGTLFVYAR
SASPRHGFTIMNRLNVENRTEPITKDLDFQLQDPFLLYRNAQLSIYGIWFYDEVECQRIA
ELMKNLTQLEQLKAQQEVGSPISNQNEAVDIVQMLFKAEHEYNKVKLSSEPKQMTSSNLI
RNSSNLIKPIPIKLTEFGTDTHYQQVQQQNKSTELGTKHLNLAVLFGTQEKSTLTNVPNE
TQEFKSKASSRPAVVRSLSYEEPRKLLELETSQNVKKQFCPAIQKLMSRGVDLHPVSELP
ENHSCENQSERSVEESLAGLFQSQSSTGNISLQQTRLDKSSSLFPKGTHKLLQKLHCTQA
SISTSCPTVIHSDLFSRTPNGSQMQPVSQSHSAYLSSTRQVQPEMHHVPTIDKSKSTIAS
NSCTNQIQASSIIPPHELFQKLQIVQQDQQHHAGKMTLAAKFSAQPPPLVNQSDSAMKHF
DSQTEKFISSEKPNLLIQAISPQRIPATVIPSLLMSPTVFTQSSVGKPMTRVEASAILLP
QTDTIMAPKQLHSGLHSSAQVAELTIKKTHTLTKTQLQETLLYLLQNDPNFVNAIYEAYL
TSQSNTSAEKKT
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtatcggggagcagaggattggatattagcctcgcagccttacaaaggcag
gatccgtatatttttcggattgtggacgtggctagtcaggtagcgctatacaccttcagt
cagagagacaatgaatgggagaagactgacgtcgaagggaccttatttgtttatgcaaga
tctgcttctccaaggcatggttttaccatcatgaacagacttaatgtggagaacaggact
gaaccaattaccaaggatttggactttcagttacaagacccttttctactctatagaaat
gcacaattgtcaatctatggcatctggttctatgatgaggtggaatgtcaaagaattgca
gaacttatgaagaatttaactcagctggagcagttgaaggcacaacaagaagttggatca
ccaatttctaaccaaaatgaagcagtggacattgtgcagatgctgttcaaggctgaacac
gaatataataaggttaagctgtcttctgagccaaaacagatgactagttccaatctgatt
cgcaatagttcaaatttgatcaagccaattccaattaaattgactgagtttggaacagac
actcattaccaacaagtacagcaacagaacaagagcacagaattgggaacaaaacatttg
aatttggcggtcttgtttggaacacaagaaaaatctactttaactaatgtgccaaatgaa
acacaggaattcaagagtaaagcttccagtcgaccagctgttgtacgttctctgtcttat
gaggaacccagaaaactgctcgagcttgaaacttcccaaaatgtcaaaaagcagttttgt
cctgctattcagaaactaatgagtcgtggagttgacctgcatccagtatctgagttacca
gaaaatcattcttgtgaaaaccaaagtgaaagaagtgtggaagaatcattagcaggactg
ttccaatctcaatcctcaacaggaaatatctctctgcagcaaactcgcttggataaatcc
agttccttattccctaaaggtactcacaagttgcttcagaaactacattgtacccaggca
tcaatttccacatcatgtccgactgttatacactctgacctcttcagcagaactccgaat
ggttcccagatgcagcctgtttcacagtctcattctgcctatcttagctccacccgacaa
gtgcaacctgaaatgcaccatgttccaacaatagacaagtccaagagcactattgcctca
aatagttgtactaatcaaatacaagcctccagtatcataccccctcatgaattgtttcag
aagctgcagatagttcagcaggatcagcaacatcatgctggaaaaatgactcttgcagct
aagttttcagctcagccgccaccattagtcaatcagtctgattctgcaatgaaacatttt
gattctcaaactgaaaaatttatcagttcagaaaaaccaaacctacttattcaggcaatc
tccccacagcgcattccagctacagttataccatctctgttgatgtcgcccacagtgttc
acccagtcttcagtgggaaagccaatgacgagagtagaagcaagtgccatacttttacca
cagacagataccattatggctccgaaacagttacacagtggtttgcattcatctgcacag
gtggcagagctgactattaaaaaaacacatacgcttaccaagactcagttacaggaaact
cttttgtatcttttgcagaatgatcccaactttgtgaatgccatttatgaagcttatctc
acaagccaatcaaacacctcagcagagaagaaaacttga
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