Hemiscyllium ocellatum (epaulette shark): 132826370
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Entry
132826370 CDS
T09720
Symbol
trim8b
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM8b
KO
K12001
tripartite motif-containing protein 8 [EC:
2.3.2.27
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hoc04121
]
132826370 (trim8b)
Enzymes [BR:
hoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132826370 (trim8b)
Ubiquitin system [BR:
hoc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
132826370 (trim8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRIM_CC
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_2
zf-B_box
zf-C3HC4_3
zf-RING_10
THP2
zf-Nse
DivIC
zf-RING_6
zf-RING_5
RING_XB3-XBAT31
U-box
Leu_zip
Motif
Other DBs
NCBI-GeneID:
132826370
NCBI-ProteinID:
XP_060698230
LinkDB
All DBs
Position
22:complement(56246469..56337098)
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AA seq
598 aa
AA seq
DB search
MAENWKSCFEEELLCPICLQVFVEPVQLPCKHNFCRACIGEAWGKESVSRCPECNNVYPQ
KPALEKNLKLSNIVEKFNSFTADAAAVAAAASSSSSAGGGSNNNNAATNPAASSAAYSPL
CCRYCRNSPAQKVCLRCDTGCCQAHVGAHLQAASVSGSHLLIEAGDARAWSCAQHDAYRL
LHCETDQVAVCRYCYYMGSHHGHSICDLEVRRNEIRQILMKQQERLSEREQDIEEQIYKL
KTDKSVIEEKVQQLKEEVRLQYEKMRQILEEDLGKTLELIDKTRTKFCDENASQVHQLNE
RLEEAKKLLNSVQKMWDRTEDISFMKNTKSVKILLERTQACTGNGLPPPKFGHLQPKPFL
SEIGKKEKHIRKLLEGTISTPVPFLQSVPAYTCNVSNAAGEKRKHSTAFPMPTTSAVDNG
FLEVTAGNVSSQFMGQSGSVVEGQSAQSLVPCSSSPHIVGLTSGPQPVHTGPVFNTTHYP
NGTPPQQSVLSQSVGYGGRKILVCSVDNCYCSGVPSVSNHNGHQPYSRSGTFPWSVTSQE
YAHALPPAPSVPQSLISYGMGSASHNNTAGKITAGYMANPSLNTTPQTNLLNSVYHTF
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaactggaagagctgcttcgaggaggaacttctgtgccccatctgcctgcag
gtcttcgtggagccggtgcagctgccgtgcaagcacaacttctgccgggcttgcatcggc
gaggcctggggcaaggagtcggtgagccgttgccccgagtgtaacaacgtctacccgcag
aaaccggcgctggagaagaacctcaagctcagcaacatcgtggaaaaattcaactccttc
acggccgatgccgccgccgtggccgctgccgcttcgtcctcgtcctccgccggcggcggc
agcaacaacaacaacgccgccaccaacccagcggcctcgtccgccgcctacagcccgctc
tgctgccgctattgccgcaactcgcccgctcagaaggtctgcctccgctgcgacaccggc
tgctgccaggcccatgtcggcgcgcacctgcaggccgcctcggtcagcggcagccacttg
ctaatcgaggccggggatgcgcgggcctggagctgcgctcagcacgacgcctaccggctg
ctgcactgcgagacggaccaggtggccgtctgccgctactgttactacatgggcagccac
catggccacagtatctgcgacctggaggtcaggaggaatgagattcggcaaatcttgatg
aaacaacaagagagactatcagaaagagaacaggatattgaagaacaaatctacaaactg
aaaactgataaaagtgtaattgaggaaaaagtccagcaattaaaagaagaagtacgcctg
cagtatgagaaaatgcgtcagatcttggaagaggatctggggaagactttggaactcatt
gataaaacacgaacaaaattctgtgacgaaaatgcatcgcaagtacatcagctaaatgag
cgactagaggaggctaaaaaattactcaactctgtccaaaaaatgtgggacagaacagag
gatatttcctttatgaagaataccaaatctgtaaagattttactggaaaggactcaagct
tgtactggaaatggattgccacctcccaaatttggtcacctccagccaaaacctttcttg
agtgagattgggaaaaaggaaaaacacatcagaaagttgcttgaagggacaataagcact
cctgttccgtttctgcagagcgttcctgcttacacctgcaacgtttccaatgctgctgga
gaaaaacgcaagcactccactgctttccctatgcccacaacatccgctgtggataatggt
ttcctggaagtaacggctgggaatgtttccagccagttcatgggccaaagcgggtctgtc
gtggagggccagtcagcacagtcccttgtgccctgcagctcttccccacacattgtggga
ctgacgagcggtccacagcccgtccacacaggtccagtcttcaatacaactcactatccc
aatggcacaccacctcagcagtctgtactttcccagtcagttggttatggtgggcgcaaa
atcctcgtctgctcggtggataactgttactgttctggtgtgccttctgtttcgaaccac
aatggacaccagccgtacagcagatcaggcactttcccatggtctgtgacatcgcaggaa
tacgcacatgctcttccacctgctccctcggtacctcagtccctcatatcatatggaatg
gggtcagcatctcacaacaatactgcaggcaagataactgcaggctatatggccaatcct
tcactgaacactacaccgcaaactaatcttctaaattctgtctaccatacattttga
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