Haliangium ochraceum: Hoch_5505
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Entry
Hoch_5505 CDS
T01103
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
hoh
Haliangium ochraceum
Pathway
hoh00061
Fatty acid biosynthesis
hoh00071
Fatty acid degradation
hoh01100
Metabolic pathways
hoh01212
Fatty acid metabolism
hoh02024
Quorum sensing
Module
hoh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Hoch_5505
00071 Fatty acid degradation
Hoch_5505
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hoch_5505
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hoh01004
]
Hoch_5505
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hoh04147
]
Hoch_5505
Enzymes [BR:
hoh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Hoch_5505
Lipid biosynthesis proteins [BR:
hoh01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
Hoch_5505
Exosome [BR:
hoh04147
]
Exosomal proteins
Exosomal proteins of breast milk
Hoch_5505
Exosomal proteins of breast cancer cells
Hoch_5505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-ProteinID:
ACY17988
UniProt:
D0LZK9
LinkDB
All DBs
Position
7548960..7550729
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AA seq
589 aa
AA seq
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MSSRPRRSADETLPARFFSSARRRGAAVAHYYDADGRGSWSPMRWTSLAGLVRELAAGLV
SLGHRPSEAVAIISQPRREWMYWDLAIMAVGGVSVGIYPTLDGSGCQALLRHSDAAFCVV
EDIGQLSKVRACMSPSGPVRALIVLEPAHIDAPPQSGIFTHEAVRRRGRSIERPTIDVES
RARALSQHDAAMFLYTSGATGAPKAAMISHGTLSAALDTFCRAGIHKTSGQSVTLLSPAN
PVQRMMDLSGVWLGMPGAYTTDVGAPLPRLARLRPTVLTARADQLERWYRAACEPANRLP
ATRWLLSWARDLRRQQAHERRTGRSSTRLQAQLVTAQRLLFQRLRRHLGNRLRRIVVTGA
SVAPEEVEFFDAAGINVIETWHMAETCGIGTLDGSHQRQLGSIGQPLDGIELALDPAGEL
LIRGPNVFSGYYKGGAATTMAFTADGYLRTGDIAQVDENGGYRFAGRRDERLETTGGAQV
TPRLIERMLETDPTIEHALVVENKRPYLTALVAVSEAARAQLGENALARTVEGVIATKNA
DLPAGQQIRAVRVLPHALGLASGELTPTLAVKRAEVLRKFHYLVAEMYD
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
gtgagctcgcggccgcgcaggagcgctgacgagaccctgccggcgcgcttcttctccagc
gcgcgacggcgcggcgccgcggtggcgcactactacgacgccgacggccgcggctcgtgg
tcgccgatgcgttggacctcgctcgccggtctggtgcgcgagctcgcggccggcctggtg
tcgctcggccatcgcccctccgaggccgtggccatcatcagccagccgcgccgcgagtgg
atgtactgggacctggccatcatggccgtgggcggcgtgagcgtgggcatctacccgacg
ctcgacggctccggctgccaggcgctcttgcgccacagcgacgccgccttctgcgtggtc
gaggatatcggccaactgtccaaagtccgcgcctgcatgtcgccgagcggccccgtgcgc
gcgctgatcgtcctcgaacccgcgcacatcgacgcgccgccgcagtcgggcatcttcacc
cacgaggccgtgcgccgccgcggacgcagcatcgagcggccgaccatcgacgtcgagtcg
cgggcgcgggcgctgtcgcagcacgacgcggccatgttcctctacaccagcggcgccacc
ggcgcgcccaaggcggccatgatctcgcacgggacgctcagcgccgcgctcgacactttc
tgccgcgccggtatccacaagaccagcggccagagcgtcaccctgctctcgcccgccaac
ccggtgcagcgcatgatggacctcagcggcgtgtggctgggcatgccgggcgcctacacc
accgacgtgggcgcgccgctgccgcgcctggcgcgcctgcgcccgaccgtgctcacggcc
cgcgccgaccagctcgagcgctggtaccgggccgcctgcgaacccgccaaccgcctgccg
gcgacccgctggctgctgtcatgggcccgcgatctgcgccggcaacaggcccacgagcgc
cgcaccgggcgctcgtccacgcgcctgcaagcccagctcgtgaccgcgcagcggctgctg
tttcagcgcctgcgccgccacctgggcaatcgcctgcggcgcatcgtggtcaccggcgcc
tcggtcgcccccgaggaggtcgagttcttcgacgccgccggcatcaacgtcatcgagacc
tggcacatggccgagacctgcggcatcggcaccctcgacggctcgcaccagcgccagctc
ggcagcatcggccagccgctcgacggcatcgagctggccctcgacccggccggcgagctg
ctgatccgcggtcccaacgtgttctccggctactacaagggcggcgcggcgaccaccatg
gcgttcacggccgacggctacctgcgcaccggcgatattgcccaggtggacgaaaacggc
ggctaccgctttgccggacgccgggacgaacgcctggagaccaccggcggcgcgcaggtg
acgccgcggctgatcgagcgcatgctcgagaccgacccgaccatcgagcacgcgctggta
gtcgagaacaagcgcccctatctcaccgcgctggtggccgtgagtgaggccgcgcgcgcg
cagctcggcgagaacgcgctggcccgcaccgtcgagggcgtgatcgcgaccaagaacgcc
gacctccccgccggccagcagatccgcgcggtgcgcgtgctgccccacgccttgggcctg
gccagcggcgagctgacgccgaccctggcggtcaagcgcgccgaggtgctgcgcaaattc
cactacctggtcgccgagatgtacgactga
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