Helicobacter pylori HPAG1: HPAG1_0745
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Entry
HPAG1_0745 CDS
T00365
Name
(GenBank) hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
hpa
Helicobacter pylori HPAG1
Pathway
hpa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPAG1_0745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpa03019
]
HPAG1_0745
Messenger RNA biogenesis [BR:
hpa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HPAG1_0745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
HDOD
KH_1
KH_KhpA-B
KH_NusA_2nd
KH_2
SLATT_6
Motif
Other DBs
NCBI-ProteinID:
ABF84812
UniProt:
Q1CTB0
LinkDB
All DBs
Position
complement(781310..782899)
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AA seq
529 aa
AA seq
DB search
MSSGLIYISLEVLVACLITALIMYYVMKKIYYARGQAALKSASAKAKLMEFQAKSFVEAE
EVRMKSQECKLQQQYENKNLQLKTHFEKKEVHLKHLEAQHKEFVRDEKRYLEKEKKELEK
ERQILEQEKENFKKQRVVCKEAQAKALDAMLNYMAYTKDEIKNMILEQLEEELEAQKSAL
IRRYEKEAKEEGKKKSYAILAEATARFAGNYATENLTTRIALPCSDYIGRVIGKDGKNIE
AFKKVSGVDIEFSEDSSELCLSSFNLYRREVASETLKILIEDGRIQPNRIEEVYHRVARN
LEKELLSEGESVVLELELGAMEDELKILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQL
GGDKKLARRAGILHDIGKALTQELGRDHVNLGVEVCKRHKEDPVVINAIYAHHGHEEILS
VECASVCAADALSAGRPGARRKSDEEYAKRMQALEEIALEFDGVEKAYAMESGRELRVIV
KSNQVRDNQVPIIARKIAKKIEESAQYVGEVGVQVVRENRFKTTATLKQ
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgggttaatttacatttcattagaagtattagtagcgtgtttgattaccgct
ctaatcatgtattatgtgatgaaaaagatctattacgctagagggcaagccgctttaaaa
agcgcttcagctaaagccaaattgatggagtttcaagcgaaatcttttgtggaagctgaa
gaggtgcgcatgaaaagccaagaatgcaaattgcaacagcaatatgaaaacaagaacttg
caactaaaaacccattttgaaaaaaaagaagtgcatttgaagcatttagaagcgcaacac
aaagaatttgtaagagatgaaaaacgctatttagaaaaggaaaaaaaagagcttgaaaaa
gaacgccaaattttagaacaagaaaaagaaaattttaaaaaacagcgcgttgtttgcaaa
gaagctcaagccaaagcgctagacgcgatgctcaattacatggcttacactaaagatgaa
attaaaaacatgattttagagcagttagaagaagaattagaagcgcaaaaaagcgcgtta
atcaggcgttatgaaaaagaagccaaagaagagggcaagaaaaaatcgtatgccatttta
gcggaagcgacagcccgttttgcgggtaattatgcgacagagaatttaacaactcgtatt
gctttgccttgctcagattatatcggtcgtgtgataggcaaagacgggaaaaatattgaa
gcgtttaaaaaggtcagcggggtggatatagaatttagcgaagatagcagcgaattgtgt
ttgtccagtttcaatctttatcggcgtgaagtagcgagcgagacgcttaaaattttaata
gaagacggccgtatccagcctaacaggattgaagaggtttatcatagagtcgcgcgcaac
ctggaaaaagaattgctttctgaaggggagagcgtggtgttagaattagagcttggggct
atggaagatgagcttaaaattttaataggcaaaatgcgttaccgctccagttttgggcaa
aacgctttacagcattctaaagaagtcgctcttttagccggcttgattgcagaacagctt
gggggggataaaaagctcgccagaagagccggtattttgcatgatattggtaaagcgctc
actcaagagcttgggagagaccatgtgaatttaggggttgaggtgtgcaagcgccataaa
gaagacccggttgtgattaatgcgatttatgcccaccatgggcatgaagagattttgagc
gtggagtgcgcgagcgtgtgcgcggctgatgcgctttcagcagggcgtcctggggctaga
agaaagagcgatgaagaatacgctaaacgcatgcaagctttagaagagattgcgttagaa
tttgatggggtggaaaaagcgtatgcgatggagagcgggcgagaattaagagtgattgtc
aaatccaaccaagtcagggacaatcaagtgccaattattgccagaaagatcgctaaaaag
atagaagagagcgctcagtatgtgggcgaagtgggcgtgcaagtggtgcgagaaaatcgt
ttcaaaacgaccgctacgctcaagcaatga
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