KEGG   Haemophilus parahaemolyticus: E5Q53_07065
Entry
E5Q53_07065       CDS       T06595                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
hpaa  Haemophilus parahaemolyticus
Pathway
hpaa02024  Quorum sensing
hpaa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hpaa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    E5Q53_07065 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    E5Q53_07065 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hpaa03019]
    E5Q53_07065 (hfq)
   03036 Chromosome and associated proteins [BR:hpaa03036]
    E5Q53_07065 (hfq)
Messenger RNA biogenesis [BR:hpaa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     E5Q53_07065 (hfq)
Chromosome and associated proteins [BR:hpaa03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    E5Q53_07065 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: QEN11204
UniProt: A0AAE6MPC9
LinkDB
Position
complement(1466702..1466986)
AA seq 94 aa
MAKGQSLQDPYLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPARAISHGNNHNSHAPVHVTQTVEIVENVTE
NT seq 285 nt   +upstreamnt  +downstreamnt
atggcaaaaggtcaatcattacaagacccttacttaaatgcactacgtcgtgaacgtatt
ccagtttcaatttatttagttaatggaatcaaactacaaggacagatcgaatcattcgac
caattcgttattttattgaaaaacacggtaagccaaatggtttacaaacacgcgatttca
actgtggtgcctgctcgagcaatttctcacggcaataaccacaattcacatgccccagtg
cacgtgacacaaaccgttgaaattgttgaaaacgtaacggaataa

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