Hafnia paralvei: AL518_08700
Help
Entry
AL518_08700 CDS
T05667
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
hpar
Hafnia paralvei
Brite
KEGG Orthology (KO) [BR:
hpar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpar03016
]
AL518_08700
Enzymes [BR:
hpar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
AL518_08700
Transfer RNA biogenesis [BR:
hpar03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
AL518_08700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AMH18089
UniProt:
A0A2A2ME30
LinkDB
All DBs
Position
complement(1967101..1967661)
Genome browser
AA seq
186 aa
AA seq
DB search
MSDTRRLFFALPLPPKTQRALVKWRAEQFPPEAGRPIAAANLHITLAFLGEVSEQKSLAL
QNMASRIKQPAFSLDLDDAGHWPGAGVVWLGSRRAPRGLLQLAELLRSQAARSGCYQSPF
PFHPHVTLLRGATKTVAIPPSGFHWPVAFEHFALYSSEFRRGRTRYDQIACWPLITQTKR
GSELSE
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatacccgccgcctattttttgccctgccattaccgcccaaaacccagcgagca
ctggtgaaatggcgtgcagagcagtttccaccggaagctgggcgtccgattgctgcggcc
aatctgcatatcacattggcttttctcggcgaggtgagcgaacaaaaatcgctggcatta
caaaatatggcttctcgcatcaaacagcctgcgtttagtcttgatttggacgatgcaggt
cactggcccggcgctggggttgtatggcttggctcacgccgagcaccacgcgggctactg
caattagctgaacttttgcgctcacaggccgctcgtagtgggtgctatcaaagtcctttc
ccctttcaccctcatgttacgctgttacggggtgcgacaaaaacggtggcaataccgcca
tcaggttttcattggcccgtagcatttgaacactttgcgctctactcctctgaatttcgg
cgcggacgcactcggtatgatcagatcgcatgttggccattaatcacgcaaacaaaacgc
ggttctgaactttcagaataa
DBGET
integrated database retrieval system