Glaesserella parasuis SH03: JL26_06105
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Entry
JL26_06105 CDS
T03301
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hpas
Glaesserella parasuis SH03
Brite
KEGG Orthology (KO) [BR:
hpas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpas03032
]
JL26_06105
03400 DNA repair and recombination proteins [BR:
hpas03400
]
JL26_06105
Enzymes [BR:
hpas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
JL26_06105
DNA replication proteins [BR:
hpas03032
]
Prokaryotic type
DNA Topoisomerases
JL26_06105
DNA repair and recombination proteins [BR:
hpas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JL26_06105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF5748
Motif
Other DBs
NCBI-ProteinID:
AIK17394
LinkDB
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Position
complement(1173806..1176472)
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AA seq
888 aa
AA seq
DB search
MSELAKDIIPISIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDQSGNVSS
KPYVKSARVVGDVIGKYHPHGDSAVYYTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAM
RYTEVRMQKITQELLTDLDKETVDFSPNYDGKEMIPDVLPTKIPALLVNGSSGIAVGMAT
NIPPHNLNEVLNGCLAYIENEQITIEELMQHIPGPDFPTAAIINGRKGIEDAYRTGRGKV
YVRAKASVETTSKGREQIVVTELPYQVNKKNLIEKIAELVRDKRIEGISSIEDYSDKKGI
SIVIEIKNNAVGEVVLNNLYALTQMQVTFGINMVALDHGQPKIFNLKQIIEAFVMHRREV
VTRRTVFELRKARERAHILEGLAIALANIDPVIELIRNSKTADEAREGLLDRPWSLGNVA
PMLEAAGVDASRPEDLASEFGIRDGQYYLSEDQARAILELRLHRLTGLEHEKIVDEYKEL
LVEISELLHILNSSERLMEVIREELEKIKAEFGDERRTEITAASGDINLEDLIAQEDVVV
TLSHAGYVKYQPLSDYEAQRRGGKGKSATKMKEDDFIEKLLVANTHDTILCFSSCGRLYQ
LKVYQLPQASRGARGTPIVNILPLVKEENERITAILPVPNGEFSADKFIFMATASGTVKK
VSLDAFSNVRSSGLIALKLREGDELIGVDITNGESEIMLFSAQGRVVRFAETAVRGMGRV
ATGVRGIKLATTEISVDDAEEVDIETVENEEAEEASSVNLTTDKVVSLVIPHTQGEILTV
TQNGYGKRTALGEYPVKSRATKGVVSIKVNERNGKVVAAVQVEENDQIMLITDAGTLVRT
RVNEVSLVGRNTQGVRIIRTAEDEHVVSLERICEIEDDGIENLSVEEA
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaattggctaaagatattattcctatcagtattgaagaggaactaaaaaattcc
tatcttgattatgcaatgtctgtgattgttgggcgagcgttaccagatgtgcgagatggt
ttgaagcccgttcatcgacgcgtacttttttctatggatcaaagcggtaacgtatcatct
aaaccttatgtgaaatcggcacgtgtagtcggtgatgtgatcggtaaatatcaccctcac
ggtgattctgcggtgtattatacgattgtgcgtatggctcagccgttctctctgcgttat
atgttggtagatggtcaagggaactttggttcgattgacggggatgcgcctgcggcaatg
cgttataccgaagtgcgtatgcagaagattacgcaagaattgttaacggatttggataaa
gaaacagtggatttctcgccaaactatgatggtaaagagatgatccctgatgtattaccg
actaaaattccggcattgcttgttaatggttcttcgggaatcgccgtgggtatggcaacc
aatattcctcctcataacctaaatgaagtgttaaacggttgcttagcttatattgaaaac
gaacaaattacgattgaagagttgatgcaacatattcccggtcctgatttcccaacggcg
gcgattattaatggtcgtaaagggattgaagatgcttatcgtacaggtcgtggcaaagtg
tatgtacgagccaaagccagtgttgaaacaacttcaaaaggccgtgagcagattgtcgtc
acggaattgccgtatcaagttaataaaaagaatttaatcgaaaaaattgccgaattggtg
cgtgataagcgtattgaaggtatttcaagtattgaagactattctgataaaaaagggatt
tcgattgttattgaaatcaaaaataatgctgttggtgaagtggtactcaataatttgtac
gctctaacacaaatgcaagtgactttcggtatcaatatggtggcactcgatcatggtcag
ccaaaaattttcaatctcaaacagattattgaagctttcgtgatgcaccgtcgtgaagtt
gtaacacgccgtacggtctttgaattgcgtaaagcacgtgaacgtgcacatattttagaa
ggtctagcgattgcattagctaatatagatcctgtgattgagctgattcgaaattccaaa
actgccgatgaagcacgtgaaggtttattggatcgtccgtggtcgttaggtaatgttgca
ccaatgcttgaagcagcgggtgtagatgcttctcgtccagaagatttagcctctgaattc
ggcatacgtgacgggcaatattatttatcggaagaccaagctcgtgcaattctagagctt
cgcttgcaccgcttaacaggcttagaacatgaaaaaatcgtagacgaatacaaagaatta
ttggtagaaatcagcgagttattacacattttaaatagctcagagcgtttaatggaagtc
atccgtgaagagcttgaaaaaatcaaagccgaatttggcgatgagcgtcgcactgaaatt
actgcggcttcaggcgatattaatttagaagatttaattgctcaagaagatgtagttgtg
accttatcgcacgctggttatgtgaaatatcagccgttatcggattacgaagcgcaacgt
cgtggtggtaaaggtaaatcagcaacgaaaatgaaagaggatgatttcattgagaaatta
ttggtcgctaatactcatgataccattctttgtttctcaagctgtggtcgtttatatcaa
ttaaaagtctatcaattaccacaggcaagccgtggtgcaagaggtacgccaatcgtaaat
attcttccacttgtaaaagaggagaatgagcgtatcactgcaattcttcccgttccaaat
ggtgaatttagcgctgataaatttatttttatggcaacggcgagtggtacggtgaaaaaa
gtttcgctcgatgcatttagtaatgttagatcaagcggtctaattgcattaaaacttcgc
gagggtgatgaattaatcggggtagacattaccaatggcgagagtgaaatcatgttgttc
tcggcgcaaggtcgagtggtacgctttgcagaaactgcagtgcggggaatggggcgtgtt
gcaacaggggttcgaggtattaaattagcaacaaccgaaatttcagtcgatgatgctgaa
gaagtcgatattgaaactgttgaaaacgaagaagccgaagaagcctcaagtgttaactta
accaccgataaagtggtttcccttgtaattccacatactcaaggtgaaatcttaaccgtt
acccaaaacggttatggtaaacgtactgccttaggtgagtatccggtcaaatctcgtgca
acaaaaggggtggtttcaattaaagtgaatgaacgtaacggtaaagtggttgcagcagtt
caggttgaagaaaatgaccaaattatgttgattaccgatgccggtacattagtacgtacc
cgtgtaaacgaagtcagccttgtaggacgtaatacccaaggtgttcgtattattcgtacc
gcagaagacgaacatgttgtcagccttgaacgaatctgtgaaattgaagacgacggtata
gaaaatttatctgttgaagaagcataa
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