Glaesserella parasuis SH03: JL26_11320
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Entry
JL26_11320 CDS
T03301
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
hpas
Glaesserella parasuis SH03
Pathway
hpas02024
Quorum sensing
hpas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JL26_11320
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JL26_11320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpas03019
]
JL26_11320
03036 Chromosome and associated proteins [BR:
hpas03036
]
JL26_11320
Messenger RNA biogenesis [BR:
hpas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
JL26_11320
Chromosome and associated proteins [BR:
hpas03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
JL26_11320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Gag_p24_C
Lyase_8_N
Motif
Other DBs
NCBI-ProteinID:
AIK18275
UniProt:
A0A084F0J3
LinkDB
All DBs
Position
complement(2213385..2213666)
Genome browser
AA seq
93 aa
AA seq
DB search
MAKGQSLQDPYLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPARAISHNNNSNHAHQAAPVQSAEVVEKVE
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaggtcaatctttacaagatccatacttaaatgcacttcgccgtgaacggatt
ccagtttccatttacctcgtgaatggcattaaattacaaggtcaaattgagtctttcgat
caattcgttattttattaaaaaacacagtgagtcaaatggtttacaagcacgcaatttca
accgttgtgccagctcgtgcgatttctcacaacaataactctaaccacgctcatcaagcc
gcaccagtgcaatctgctgaagtggtagagaaagtggaataa
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