Helicobacter pylori G27: HPG27_1010
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Entry
HPG27_1010 CDS
T00777
Name
(GenBank) primosomal protein replication factor
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
hpg
Helicobacter pylori G27
Pathway
hpg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HPG27_1010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpg03400
]
HPG27_1010
Enzymes [BR:
hpg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPG27_1010
DNA repair and recombination proteins [BR:
hpg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HPG27_1010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
PriA_C
Helicase_C
PriA_CRR
AAA_22
AAA_19
ADDB_N
nSTAND3
PhoH
AAA_7
zinc-ribbons_6
AAA_30
RecA
Glycos_transf_2
GpA_ATPase
DUF4508
CobU
SLFN-g3_helicase
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
ACI27763
UniProt:
B5Z864
LinkDB
All DBs
Position
complement(1112814..1114556)
Genome browser
AA seq
580 aa
AA seq
DB search
MGVVLEEVSKPSFECLESEKTPYFLLPFQIELAIFIAQYYSANLSSVLSLFTPFKECDGM
GLEKIEPVLNILSQTQTNALKELQKHSASLLFGDTGSGKTEIYMHAIAQTLEQKKSALLL
VPEIALTPQMQQRLKRVFKENLGLWHSKLSQNQKKQFLEKLYSQEIKLVVGTRSALFLPL
KELGLIIVDEEHDFSYKSHQSPMYNARDLCLYLSHKFPIQVILGSATPSLSSYKRFKDKA
LVRLKGRYTPTQKNIIFEKTERFITPKLLEALQQVIDKNEQAIIFVPTRANFKTLLCQNC
YKSVQCPFCSVNMSLHLKTNKLMCHYCHFSSPIPKICNECQSEVLVGKRIGTMQVLNELE
GLLKGAKIAILDKDHTSTPKKLHNILNDFNAQKTNILIGTQMISKGHDYAKVSLAVVLGI
DNIIKSNSYRALEEGVSLLYQIAGRSARQISGQVFIQSTETDLLENFLEDYEDFLQYELQ
ERCELYPPFSRLCLLEFKHKNEEKAQQLSLKASQTLSLCLEKGVTLSNFKAPIEKIASSY
RYLILLRSKNPLSLIKSVHAFLKTAPNIPCSVNMDPVDIF
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
ttgggcgtcgttcttgaagaagtttcaaaaccctcttttgaatgcttagaatcagaaaaa
accccttattttttactcccctttcaaatagagctcgctatttttatcgctcaatattac
tcggctaatctttcttcagtcttaagcctttttaccccttttaaagaatgtgatggaatg
gggttagaaaaaattgagcctgttcttaatatattaagccaaacgcaaaccaacgcttta
aaagaattgcaaaaacattcagcaagcttgctctttggtgatacgggtagcgggaaaacc
gaaatttatatgcatgcaatcgctcaaactttagagcaaaaaaaaagcgctttgttgtta
gtgccagaaatcgccctcacccctcaaatgcagcaacgccttaaaagggtttttaaagaa
aatttaggcttgtggcatagcaaactctctcaaaatcaaaaaaaacaatttttagaaaag
ctttattcgcaagaaatcaaattagtggtaggcacacgaagcgcgttgtttttacccctt
aaggagttgggtttaatcattgtagatgaagagcatgacttttcttataagtctcatcaa
agccctatgtataacgctagggatttatgcttgtatttatcccataaattccctattcaa
gtgatcttaggctctgctacgccaagtttgagtagttataaacgctttaaagataaggct
ttagtgcgcttaaaggggcgctacacccccacgcaaaaaaacattatttttgaaaaaacc
gagcgttttatcacgcccaaactcctagaagctctgcaacaagtgatagacaaaaacgag
caagccattatttttgtgcctacaagggctaatttcaaaaccttgctgtgccaaaattgc
tacaaaagcgttcaatgccccttttgcagcgtgaatatgagtttgcatttaaaaaccaac
aaactcatgtgccattattgccatttttcaagccctatccctaaaatttgcaacgagtgt
cagagcgaagttttagtgggtaaaaggataggcaccatgcaagtgttgaacgaattagaa
ggccttttgaaaggcgctaaaatagcgattttggataaagatcacaccagcacgccaaaa
aaactccacaatattttaaacgatttcaacgctcaaaaaacgaatatcttaatcggcact
caaatgataagcaaagggcatgattacgctaaagtgagtttagcggttgttttaggcata
gacaatatcatcaaatctaatagttacagggctttagaagaaggcgtgtcactgctttat
caaatcgctgggaggagtgctaggcaaatttctggccaagtgttcattcaaagcaccgaa
acggatctgttagaaaatttcttagaagattatgaagattttttacaatacgaattgcaa
gaaaggtgcgaactctacccgcctttttcaaggctgtgtttgttagagtttaagcataaa
aacgaagaaaaagcccaacaattgagcctaaaagcctcccaaaccctttctttgtgttta
gaaaagggcgtaacgctctccaatttcaaagcccccattgaaaaaatcgcctcttcttac
cgctaccttattttgttgcgttccaaaaaccctttaagcctaatcaaaagcgtacatgcg
tttttaaaaaccgcccctaatatcccttgcagcgtgaacatggaccctgtggatattttt
taa
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