Helicobacter pylori Lithuania75: HPLT_01115
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Entry
HPLT_01115 CDS
T01896
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
hph
Helicobacter pylori Lithuania75
Brite
KEGG Orthology (KO) [BR:
hph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hph03016
]
HPLT_01115
03036 Chromosome and associated proteins [BR:
hph03036
]
HPLT_01115
Transfer RNA biogenesis [BR:
hph03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HPLT_01115
Prokaryotic type
HPLT_01115
Chromosome and associated proteins [BR:
hph03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
HPLT_01115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C
GIDA_C_1st
Pyr_redox_3
FAD_oxidored
Pyr_redox_2
AlaDh_PNT_C
Pyr_redox
HI0933_like
FAD_binding_2
Uteroglobin
FAD_binding_3
Thi4
Motif
Other DBs
NCBI-ProteinID:
ADU82665
UniProt:
E8QMW9
LinkDB
All DBs
Position
complement(211773..213638)
Genome browser
AA seq
621 aa
AA seq
DB search
MVKESDILVVGGGHAGIEASLIAAKMGARVHLITMLIDTIGLASCNPAIGGLGKGHLTKE
VDVLGGAMGIITDHSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLSVSQ
EMTESLILENDEVVGVTTNINNTYKAKKVIITTGTFLKGVVHIGEHQNQNGRFGENASNS
LALNLRELGFKVERLKTGTCPRVAGNSIDFEGLEEHFGDTNPPYFSYKTKDFNPTQLSCF
ITYTNPITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTIH
KSEYYINGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHTLETKKIK
GLYLAGQINGTTGYEEAAAQGLIAGINAVLALKNQAPFILKRNEAYIGVLIDDLVTKGTN
EPYRMFTSRAEYRLLLREDNTLFRLGEHAYRLGLMEEDFYKELKKDQQAIQENLKRLKEC
VLTPSKEALKRLSELGENPINDKMDGVSLLARDSFNIEKMRSFFSFLAPLNERVLEQIKI
ECKYNIYIEKQHENIAKMDSMLKVSIPKGFVFKGIPGLSLEAVEKLEKFRPKSLFEASEI
SGITPANLDVLHLYIHLRKNS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
gtggtaaaagaaagtgatattttagtggttggtggggggcatgcaggcattgaagcgagc
ttgattgcagccaaaatgggggctagagtgcatttaatcaccatgctcatagacacgatc
ggtttggcgagctgtaacccggcgattggaggcttgggtaaagggcatttgactaaagaa
gtggatgttttagggggggctatggggattattacggatcatagcggtttgcaatatcgt
gtgttaaacgcttctaaagggccggcagttagggggactagagcgcaaattgatatggac
acttaccgcatttttgcaagaaatctcgttttaaacacccctaatttgagcgtctctcaa
gaaatgaccgaaagtttaatccttgaaaacgatgaggtagtgggcgtaaccacaaacatt
aacaacacctataaagctaaaaaagtgatcatcaccacaggcacttttttaaaaggggtg
gtgcatattggcgagcatcaaaaccaaaacgggcgctttggggaaaacgcctctaattct
ttagccttgaatttaagggagcttggctttaaggtggaaaggttaaaaaccggcacttgc
ccaagagtggcaggcaatagcattgattttgaaggcttagaagagcattttggggacaca
aaccctccctatttcagctataaaaccaaagattttaaccccacccaactctcatgtttt
atcacttacactaaccccattacccaccaaatcatcagggataatttccaccgagccccc
ctatttagcggtcaaattgaaggcataggcccaaggtattgccctagcattgaagataag
atcaaccgcttcagcgaaaaagaacgccaccagctgtttttagagcctcaaaccatccac
aaaagcgaatattatatcaacggcttaagcacctctttgcccctagatgtgcaagaaaag
gtcattcattctatcaaaggcttagaaaacgccctcatcacgcgctatggctatgcgata
gaatatgattttatccagcctacagaattgacccacactttagaaaccaaaaaaatcaaa
gggctttatttggccgggcaaatcaatgggactaccggctatgaagaagcggcggctcaa
gggcttatagctgggattaatgcggtattagccttaaagaatcaagccccctttatttta
aagcgcaatgaagcttatatcggcgttttgattgatgatttggttactaaaggcacgaat
gagccttacaggatgtttactagccgagccgaataccgcttgcttttaagagaagacaac
acgctttttagattaggcgaacatgcctatcgtttagggcttatggaagaagatttttat
aaggagttgaaaaaagaccaacaagcaatacaagaaaacttgaaacgccttaaagaatgc
gtccttacccctagcaaagaagcactaaaacgcttgagtgaattaggtgaaaaccctatc
aatgacaaaatggatggcgttagccttttagcgcgcgatagttttaatatagaaaaaatg
cgttccttttttagctttttagcccccttgaacgagcgggttttagagcagattaaaatt
gaatgcaagtataatatttatattgaaaagcaacacgaaaatatcgctaaaatggatagc
atgctcaaagtttctatccctaaaggttttgtgtttaaaggcattccaggcttaagctta
gaagcggtagaaaagttagaaaaattccgccccaaaagcctttttgaagcctcagaaatc
agcgggatcaccccggcgaatttagacgttttgcatttatacatccatttgcgaaaaaac
tcttaa
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