Vreelandella piezotolerans: GYM47_10445
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Entry
GYM47_10445 CDS
T07036
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
hpiz
Vreelandella piezotolerans
Pathway
hpiz00541
Biosynthesis of various nucleotide sugars
hpiz01100
Metabolic pathways
hpiz01250
Biosynthesis of nucleotide sugars
Module
hpiz_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
hpiz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GYM47_10445 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hpiz01005
]
GYM47_10445 (kdsB)
Enzymes [BR:
hpiz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
GYM47_10445 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
hpiz01005
]
Lipid A
GYM47_10445 (kdsB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
Motif
Other DBs
NCBI-ProteinID:
QJA24486
LinkDB
All DBs
Position
complement(2278162..2278947)
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AA seq
261 aa
AA seq
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MGDTSTPFIAVVPARFGSSRLPGKPLLDIAGEPMVAHVWRRASKSQASRVVVATDDDRIR
DAMLSYGADVVMTRDDHPSGTDRLAEVVEQLGLDDETLVVNVQGDEPLIPPVLIDQVAHR
LADDPDAAMATLAEPITDVDTLFNPNVVKVVRSLQGRALYFSRAPIPWDREHFTRQPNLL
ETDAWLRHIGIYAYRASFLAAYQDLPTSTLEQLEQLEQLRALQHGYAIQVALASAVNPAG
VDTQEDLARVRALLAVEEGRS
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgggagacacgtcgacgccgttcatcgccgtagtacccgctcgttttggctcctcacgg
ctgccggggaagccgctcctagacattgcgggagagccgatggtggcgcatgtgtggcga
cgtgccagcaaaagtcaggcaagccgcgtcgtggtcgccaccgatgatgatcgcattcgc
gacgccatgctgtcttacggtgcagacgtcgtcatgacgcgcgacgatcacccgtcgggt
actgatcgactggccgaggtggtcgagcagctcggtctcgacgacgagacgctggtagtc
aatgtccaaggtgatgagccgcttattcctcccgtactcatcgaccaagtggcgcatcgc
ttggccgatgatcccgatgctgcgatggccacgttggcggaaccgatcacggatgtagat
acgctcttcaatcctaacgtggtgaaagtcgtgcgctcgttgcaagggcgtgcgctttat
ttctctcgagcaccgattccgtgggatcgggagcacttcacacgccagcccaacctattg
gaaaccgatgcatggctacgccatatcggtatctatgcctatcgggcaagctttttggca
gcttatcaggatttgccgacctctacgctggagcaattggagcagttagagcagcttcgc
gctctccagcatggctacgcgattcaagtggcgttggccagcgcggtgaatcctgccggt
gtggatacgcaagaggatctagcgcgtgtcagagcgcttttggcggtagaggaggggcgg
tcatga
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