Vreelandella piezotolerans: GYM47_16460
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Entry
GYM47_16460 CDS
T07036
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
hpiz
Vreelandella piezotolerans
Pathway
hpiz02020
Two-component system
hpiz02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
hpiz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GYM47_16460
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
GYM47_16460
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hpiz02035
]
GYM47_16460
Bacterial motility proteins [BR:
hpiz02035
]
Flagellar system
Chemotaxis proteins
MCPs
GYM47_16460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
sCache_2
dCache_2
HAMP
Cache_3-Cache_2
Laminin_II
DUF1664
DUF948
Spectrin_SYNE1
GldM_1st
T3SchapCesA
DUF4200
Motif
Other DBs
NCBI-ProteinID:
QJA25564
LinkDB
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Position
complement(3603008..3604795)
Genome browser
AA seq
595 aa
AA seq
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MTSNPPSTLKKRRSSLQTKVLMLVLLPLLLVTVALVSFDAYSRTQDTQEMLAEQRNMLIE
ERRAAVQDIVQVAMTAIAPIYEAAGPNDEAAKQEVASIIRAMRFEDNNYLFIYDFDGNNI
VTAPAPEREGTNMIDAQTPDGTYLIRDIIELARSGGGYYSYVWDHPGTQAMETKHSFVGR
LEKWDWLIGAGVYVVDMENALAEIETRAMSDLRDSIGITVLMAAALFIAIAMLTYAFVRR
LVGPIKRAADAMLDIAQGRGDLTRRLTIESNDEVGNLAVQFNAFAGRMQDTLRDVRRSTV
SVYHSAGDISHSSEELATRTEQAAANLQETSASMEEITSTVNHSADNAQQANKLVQSTAE
VAHQGEEAMGQVERTMRDINDSASRISDIITMIDAIAFQTNILALNASVEAARAGEHGRG
FAVVAQEVRTLASRSSNASKEIRELIDASVQHTHTGAELVRSAGATMRDIVESVSKVTDV
IGEISAGAKEQSSGIGQINTAVAEMDTMTQQNAAMVQEATTAAADMRRHAEHLNELINSF
VLGEDSASAPSRSGARQALPASGANGTGAGQELKRPALAAKPSSAEHSADDWEEF
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtaatcccccctccacgctgaaaaagcgccgttcgagtctgcaaaccaaagta
ctgatgttggtgctgcttcctttgctgctggtcaccgttgcgctggtgtcgtttgatgcg
tatagccgcacgcaagatactcaggagatgttggccgaacagcgcaacatgttgatcgaa
gagcgccgagcagccgtccaagacattgtccaagtggccatgacggccattgccccgatc
tatgaggcagcagggcctaacgatgaagcggcgaaacaagaagtggccagtatcatccgt
gctatgcggtttgaagataacaactatctcttcatttatgacttcgacggtaacaatatc
gtcacggcacccgctccagagcgagagggaaccaatatgatcgatgcgcaaacgcccgat
ggcacctatttgattcgtgacatcatcgagcttgctcgtagcggaggtggttattatagc
tacgtatgggatcaccccggcacgcaagccatggaaacgaagcactcgttcgtggggcgc
ctcgaaaagtgggattggctgatcggtgcgggggtctatgtggtggatatggaaaacgcc
ttggccgagatcgaaacacgggcaatgagcgatttacgtgactctatcgggatcactgtc
ctgatggcggctgccttgttcatcgcgatagccatgctgacgtatgctttcgttcgtcgt
ttggtaggcccgattaaacgcgctgctgatgccatgcttgatattgcccagggtcgtggt
gacctaacccgtcgtcttaccatagagagcaacgacgaagtggggaatctcgctgtccag
ttcaacgcctttgctggccgcatgcaggataccctgcgcgacgtacgccgcagcaccgta
agcgtctaccactcggcgggcgacatttcccacagctcggaagaactggcgacgcgcacc
gagcaggcagcggccaacttgcaagaaacctcggcttccatggaagagatcacgtccacc
gtgaaccacagcgccgataatgcccagcaggccaacaagttagtgcagtccaccgccgaa
gtggcgcaccaaggcgaagaggccatggggcaggtcgagcgcaccatgcgcgatatcaac
gactccgcctcgcgtatcagtgacatcatcacgatgatcgacgcgattgccttccagacc
aatattctggcgcttaatgcctcggtcgaagccgcccgcgcaggggagcacggtcgtggg
tttgcggtggtggctcaggaggttcgcacgctagccagtcgctccagtaacgcgtcgaaa
gagatccgcgagctgatcgatgcatccgtacagcacacccacaccggtgcggagctggtc
cgcagtgcaggggccaccatgcgtgacatcgtcgaaagcgtctcgaaggtcactgacgtg
atcggtgaaatcagcgcgggggccaaagagcagagcagtggcattggtcagatcaacacc
gccgtggccgagatggacaccatgacgcagcaaaacgccgccatggtgcaagaggccacc
accgccgcagcggacatgcgccgccacgccgagcacctgaacgaactgatcaactcgttc
gtgctaggagaagacagcgcctcagcgccgtcacgcagcggggcgcgccaagcgttgccc
gccagcggcgccaacggcacgggggcgggccaggagctcaagcgtccagccctggccgcc
aagccgtcgtctgccgagcatagcgcagacgactgggaagagttctaa
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