Helicobacter pylori J99: jhp_0343
Help
Entry
jhp_0343 CDS
T00020
Symbol
msbA
Name
(GenBank) multi-drug resistance protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
hpj
Helicobacter pylori J99
Pathway
hpj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hpj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
jhp_0343 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hpj02000
]
jhp_0343 (msbA)
Enzymes [BR:
hpj01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
jhp_0343 (msbA)
Transporters [BR:
hpj02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
jhp_0343 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_membrane_2
AAA_16
RsgA_GTPase
AAA_22
ABC_ATPase
DEAD
nSTAND3
AAA_29
nSTAND1
Ribosomal_L10
KAP_NTPase
AAA_5
NACHT
cobW
AAA_30
DUF87
Motif
Other DBs
NCBI-ProteinID:
AAD05924
UniProt:
Q9ZM79
LinkDB
All DBs
Position
374545..376200
Genome browser
AA seq
551 aa
AA seq
DB search
MKLFFRRYSKYLKEHYKSFIVVLFSSLVVALSTAWGTYLVKPTLDEIFINKDTHMLKILP
FLVILAYLGKSGGMYVGTYFTNFIGLDIVKKIRNAMLESLLKMEMDFFNRTKKGELIARI
TNDIGLIRASLSNYLSESLREGLTIVGLVGVVIYQSPKLALVGLVIMPLAAIPISKIIRK
VKKLAKAHQESNAKITARLSEVFNNVEAIKISNGEKLEHRAFVKENEAFFKIGIKNIAVA
EISSPLMEFLGSIAIALVIYLGGNEVIKGHISVGAFFSFITALFMLYTPIKRLTRIVSNF
QEALVASDRIHEILEREPAIIDGELTLDDAIHTIEFKKVWLAYALEDQERYVLSDINLKF
QQNEIVALKGESGSGKSSLVNLILRLYEPSKGEIFINDQKIESITQKSLREKISVVTQRV
FIFNGSVAENVAYGLEIDEIKIKECLKKAQALDFVEKMPHGIESVLDEFGANLSGGQRQR
IAIARALYKDAQVLIFDEATSALDNHTEESVKQSILELKQNRLIILISHNPSTLKLATKH
VKLEHGRLIEC
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
ttgaaactctttttcaggcgttattctaaataccttaaagaacattataaaagttttata
gtggttttattttcttctttagtggtagctttaagcacggcttgggggacttatttagtc
aagcccactttagatgaaatttttatcaataaagacactcacatgctcaaaatcctgcct
tttttagtgattttggcgtatttgggtaagagtgggggcatgtatgttggcacttatttc
actaactttattgggcttgatattgtcaaaaaaatacgcaacgccatgttagaaagcctt
ctcaaaatggaaatggatttttttaacaggactaaaaaaggcgaattgatcgcaaggatc
accaatgatataggtttgattagagcgagtttgtccaattacctttcagagagcctaaga
gaagggctaacgattgtgggattagtgggggtggtgatctatcaaagccctaaattagcg
ctagtggggctagtgatcatgccgctagccgccattcctattagtaaaatcattcgtaag
gttaaaaaactcgctaaagcccaccaagagagtaacgccaaaatcaccgctcgtttgagt
gaagtctttaacaatgtggaagcgattaaaatctctaatggcgaaaaattagagcatagg
gcttttgtgaaagaaaatgaagcgttttttaaaatcggtatcaaaaacatcgccgtggct
gaaatttcttcgcctttaatggagtttttaggctctatcgctatagcgttagtgatctat
ttaggggggaatgaagtgattaagggtcatattagcgtgggggcgtttttttctttcatc
acggccctttttatgctctatacgccgatcaaacgcctaactaggattgtctctaatttt
caagaagccttagtcgctagcgataggatccatgagattttagaaagagagccggccatt
attgatggggaattgacgctggatgatgccatacacaccattgaatttaaaaaggtatgg
ctggcttatgcgctagaagatcaagagcgttatgttttaagcgatattaatttgaaattc
caacaaaatgaaatcgtcgctctaaaaggcgaaagcgggagcggcaaaagctcattagtg
aatctgatcttacgcctttatgagccaagcaagggcgaaattttcatcaatgatcaaaaa
atagagagcatcactcaaaaatccttgagggaaaagattagcgttgtcactcaaagggtg
tttatctttaacgggagcgtggctgaaaatgtggcgtatggcttagaaattgatgaaata
aaaatcaaagaatgcctaaaaaaagcccaagccttagattttgtggaaaaaatgcctcat
gggatagagagcgttttagatgaatttggcgctaaccttagcggcgggcaacgccaaaga
atcgccattgcaagagctttgtataaagacgctcaagttttaatctttgatgaagccact
tccgctttagacaatcacacagaagagagcgtcaaacaaagcattttagaattgaaacaa
aaccgcttgatcattctcatctcgcacaacccaagcacgcttaaattagccactaagcat
gtgaaattagagcatgggcgtttgatagaatgttaa
DBGET
integrated database retrieval system
