KEGG   Helicobacter pylori B8: HPB8_1608
Entry
HPB8_1608         CDS       T01262                                 
Symbol
virB4-2
Name
(GenBank) type IV secretion system protein VirB4
  KO
K12053  ComB4 competence protein
Organism
hpl  Helicobacter pylori B8
Brite
KEGG Orthology (KO) [BR:hpl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hpl02044]
    HPB8_1608 (virB4-2)
Secretion system [BR:hpl02044]
 Type IV secretion system
  DNA uptake competence system protein
   HPB8_1608 (virB4-2)
SSDB
Motif
Pfam: CagE_TrbE_VirB TrwB_AAD_bind FtsK_SpoIIIE DUF87 AAA_29 nSTAND3 TraG-D_C RsgA_GTPase AAA_10 AAA_22 AAA_23 AAA_16 ABC_tran AAA_7 ResIII DUF5727 PduV-EutP T2SSE CbiA SMC_N Mg_chelatase
Other DBs
NCBI-ProteinID: CBI67165
UniProt: D7FG58
LinkDB
Position
complement(1575414..1577777)
AA seq 787 aa
MLEKLLSAIKQKVSNYFLGVLPKSYSMSEENNILGLYDEHFLLTKNENLVGILRLEGVSY
THLSTEQLQDLFTERQMALDSLEKVVARLVVKRRKIDHQQNIQTDSKYLQAILNQFENKE
VYENQYFLVLESAHSLQGVLEHKKKSLMHANRENFKDILSYKAHFLQETLKSLEIQLKNY
APKLLSSKEVLNFYAEYINGFDLPLKPLVGGYLSDSYIASSTTFEKDYFIQESFNQKTYN
RLIGIKAYESERITSIAVGVLLYQETPLDIIFSIEPMSVNKTLGFLKERAKFSMSNLVKN
ELLEYQELVKTKRLSMQKFALNILIKAPSLENLDAQTSLVLGLLFKENLVGVIETFGLKG
GYFSFFPERIHLNHRLRFLTSKALACLMVFERQNLGFKANSWGNSPLSVFKNLDYSPFLF
NFHNQEVSHNNAKEIARVNGHTLIIGATGSGKSTLISFLMMSALKYQNMRLLAFDRMQGL
YSFTKFFKGHYHDGQSFSINPFCLEPNLQNLEFLQSFFLSMFDLAPSRDKEALEDMNAVF
SAIKSLYETLYPKAFSLLDFKETLKRTSSNQLGLSLEPYLNNPLFNALNDAFNSNAFLNV
INLDAITQNPKDLGLLAYYLFYKILEESRKNDSGFLVFLDEFKSYVENDLLNTKINALIT
QARKANGVVVLALQDIYQLSGVKNAHSFLSNMGTLILYPQKNARELKHHFNVPLSETEIS
FLENTPLYARQVLVKNLGNGSSNMIDVSLESLGRYLKIFNSDSSHVNKVKALQKDYPTEW
REKLLKS
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgttagaaaagcttttgagcgctatcaaacaaaaagtttcaaactattttttaggggtt
ttgcctaaaagctattccatgagcgaagaaaacaacattttaggcttgtatgatgagcat
tttttgctcactaaaaacgaaaacttagtgggtattcttcgtttagagggagttagttac
acccatttaagcacagagcaattgcaagatcttttcaccgagcgccagatggcgttggat
tctttagaaaaggtcgtggcgcgccttgtggttaaaaggcgtaaaattgatcaccagcaa
aacattcaaactgactctaaatacttgcaagcgattttgaatcaatttgaaaacaaagaa
gtgtatgaaaatcagtattttttggttttagaaagcgcgcattctttgcagggcgtttta
gagcataagaaaaaatccttgatgcatgccaatagggaaaattttaaggacattctctct
tataaagcgcattttttgcaagaaactttaaaaagcttagaaatccagctcaaaaattat
gcccccaaactcttaagttccaaagaggttttgaatttttatgcggaatacattaacggg
tttgatctccctttaaagcctctagtaggggggtatttgagcgatagttatatcgctagt
tctaccacttttgaaaaagattatttcattcaagaaagctttaatcaaaaaacctataac
cgcttgattggcattaaagcttatgagagcgagcgcatcacttctatagcggtgggagtg
cttttataccaagagacgccactagatattatcttttctatagagcctatgagcgtcaat
aaaacgctgggttttttaaaagagagggccaaatttagcatgtccaatctcgttaaaaac
gaactgctagaataccaagaactagtcaaaaccaaacgcctatccatgcaaaaattcgcc
ctaaacattcttatcaaagcccctagtttagaaaatttagacgctcaaaccagcttagtt
ttagggcttttatttaaagaaaacttagtgggcgttatagaaacttttggcttgaaaggg
gggtatttttcctttttccctgaacgcatccatttaaaccaccgcttgcgctttttaact
tctaaagccctagcgtgtttgatggtgtttgaaaggcaaaatttaggctttaaggctaat
tcatgggggaatagccctttgagcgtgtttaaaaatttggattattccccttttttattc
aatttccacaaccaagaagtgagccacaacaacgctaaagaaatcgccagagtgaatggg
catactttaatcataggggctactgggagcggtaaaagcacgctgattagctttttaatg
atgagcgctttgaaataccaaaacatgcgccttttagcatttgataggatgcaagggctg
tattctttcaccaaattttttaaagggcattaccatgacggccaatcttttagcatcaac
cccttttgtttagagcctaatttacagaatctagaatttttgcaatccttttttttgagc
atgtttgatcttgccccttcaagggataaagaagccttagaagacatgaatgcggttttt
agcgcgattaagagcctttatgagaccttataccctaaagcttttagtttgctagacttt
aaagaaacgcttaaaagaacttcgtctaaccaattgggcttgagtttggagccgtatttg
aataaccccctttttaacgctttgaatgacgcgtttaactccaacgcttttttaaatgta
atcaacttagacgctatcacccaaaaccctaaagacttagggcttttagcctattacttg
ttttataaaattttagaagaatccaggaaaaacgacagcggttttttggtttttttagac
gagtttaaatcctatgtggaaaacgatttactgaacactaaaattaacgctttaatcacg
caagccagaaaagctaatggcgtggtggtgttggccttgcaagatatttaccaattaagc
ggggtcaaaaacgcccatagttttttaagcaacatggggactctcattttgtatccgcaa
aaaaacgctagggagttgaaacaccatttcaatgtgcctttgagcgaaactgaaatttct
tttttagaaaacacccctttgtatgccaggcaggttttagtcaaaaatctgggtaacggg
agttctaacatgattgatgtgagtttggaaagtttagggcgttatttgaaaatctttaat
tcagattctagccatgtcaataaagtgaaagcgttacaaaaagactaccctacagagtgg
cgtgagaaacttttgaagagctag

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