Helicobacter pylori B8: HPB8_186
Help
Entry
HPB8_186 CDS
T01262
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hpl
Helicobacter pylori B8
Pathway
hpl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hpl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HPB8_186 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpl03021
]
HPB8_186 (rpoA)
03400 DNA repair and recombination proteins [BR:
hpl03400
]
HPB8_186 (rpoA)
Enzymes [BR:
hpl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HPB8_186 (rpoA)
Transcription machinery [BR:
hpl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HPB8_186 (rpoA)
DNA repair and recombination proteins [BR:
hpl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HPB8_186 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Enkurin
Myb_DNA-bind_4
Motif
Other DBs
NCBI-ProteinID:
CBI65743
UniProt:
D7FC36
LinkDB
All DBs
Position
163429..164463
Genome browser
AA seq
344 aa
AA seq
DB search
MKVIKTAPLIPSEIKVLEKEGNRVKISLAPFEFGYAVTLAHPIRRLLLLSSVGYAPIGLK
IEGVHHEFDSLRGVTEDVSLFIMNLKNIRFIAKALVGQDSSLENQSVVVDYSFKGPMELR
ARDLNSEQIEIVNPEMPLATINEDAQLNFSLIIYKGMGYVPSENTRELMSEGYMPLDGSF
TPIKKVVYEIENVLVEGDPNYEKIIFDIETDGQIDPYKAFLSAVKVMSKQLGVFGERPIA
NTEYSGDYAQRDDAKDLSAKIESMNLSARCFNCLDKIGIKYVGELVLMSEEELKGVKNMG
KKSYDEIAEKLNDLGYPVGTELSHEQRESLKKRLEKLEDKGGND
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttatcaaaacagcacctttgatcccatcagaaattaaggtgctagagaaagag
ggcaatcgggttaagatttctctggctccatttgagtttggttacgctgttacgctcgct
caccctattagaaggctcttgcttttaagctctgtggggtatgctcccatagggttaaag
attgaaggcgtccatcatgagtttgactcactaaggggggttactgaagatgtgtcgctt
tttatcatgaatttaaagaatatccgctttatagctaaggcgttagtggggcaggatagc
tctttagaaaaccaatcggttgtggtggattattcttttaaagggcctatggagcttagg
gctagggatttgaattctgagcagatagaaatcgtcaatcctgaaatgcctctagccaca
atcaacgaagacgctcaattgaatttttcgctcattatctataaagggatggggtatgtc
ccaagcgaaaacacaagggaattgatgtctgagggctacatgccgctagacggctctttc
acgccgattaaaaaggtcgtttatgagattgaaaatgttttggttgagggcgatcccaac
tatgaaaaaatcatttttgatattgaaacagacgggcagattgatccttataaagcgttt
ttgtcagcggtgaaagtgatgagcaagcaactgggtgtttttggcgaaaggcccattgct
aacacggagtattcaggcgattacgctcaaagagatgacgctaaagatttgagcgctaag
attgaaagcatgaatttgagcgctaggtgttttaattgcttggataaaatcggcatcaag
tatgtgggcgaactcgtgttgatgagcgaagaagagcttaagggcgtgaagaacatgggt
aaaaaatcctatgatgaaatcgctgaaaaattgaatgatttgggctatccggtaggcaca
gaattaagccatgaacaaagagagagtttaaagaaaagattagaaaaattagaagataaa
ggaggtaacgactga
DBGET
integrated database retrieval system
