Helicobacter pylori SJM180: HPSJM_04730
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Entry
HPSJM_04730 CDS
T01323
Name
(GenBank) geranyltranstransferase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
hpm
Helicobacter pylori SJM180
Pathway
hpm00900
Terpenoid backbone biosynthesis
hpm01100
Metabolic pathways
hpm01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hpm00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
HPSJM_04730
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hpm01006
]
HPSJM_04730
Enzymes [BR:
hpm01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
HPSJM_04730
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
HPSJM_04730
Prenyltransferases [BR:
hpm01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
HPSJM_04730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Imm32
Motif
Other DBs
NCBI-ProteinID:
ADO02529
LinkDB
All DBs
Position
961620..962531
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AA seq
303 aa
AA seq
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MSNPNLSFYYNECERFESFLKNHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCA
LVGQKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNASLRRNHPTLHAKYDETTAVL
IGDALNTYSFELLSNALLESHIIVELIKILSVNGGIKGMILGQALDCYFENTPLNLEQLT
FLHEHKTAKLISASLIMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEEES
GKTTHLDGTKNSFVNLLGLEKASGYAQTLKTEVLNDLNLLKTAYPLLQENLNALLNTLFK
GKT
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaccctaatttatccttttattataatgagtgcgagcgttttgaaagcttttta
aaaaaccatcatttacaccttgaaagcttccacccttatttggaaaaagccttttttgaa
atggtgcttaatggaggcaaaaggttccgccctaagctttttttagccgtgctttgcgct
ttagtgggtcaaaaagattattctaaccaacaaacagaatattttaaaatcgctttaagc
attgaatgcttgcacacttattcgctcatccatgacgatttgccatgcatggataacgcc
tctttaaggagaaaccaccccactttacacgctaaatacgatgaaaccacagccgtttta
atcggcgatgcgctcaacacttactcttttgaattgctctcaaacgctttactagaaagc
catatcattgtggaattaatcaaaatcttaagcgttaatggggggattaaaggcatgatc
ttagggcaggctttggattgctattttgaaaacacgcccttaaatttagaacaactcact
ttcttacacgagcataaaaccgctaaattgattagcgcaagcctaattatggggcttgtt
gcaagcggtattaaagatgaagagctttttaaatggcttcaagcttttgggttaaaaatg
ggtctttgttttcaagtgctagatgatattatagatgttacgcaagatgaagaagaaagc
ggtaaaaccactcatttagacggcactaaaaacagctttgtgaatttattagggctagaa
aaggcaagcggttacgcccaaactttaaaaacagaggttttaaacgatttaaacctacta
aaaaccgcttatcctttattgcaagaaaatttaaacgcattattgaacactctatttaaa
ggcaaaacatga
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