Helicobacter pylori SJM180: HPSJM_06750
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Entry
HPSJM_06750 CDS
T01323
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hpm
Helicobacter pylori SJM180
Pathway
hpm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPSJM_06750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpm03400
]
HPSJM_06750
Enzymes [BR:
hpm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HPSJM_06750
DNA repair and recombination proteins [BR:
hpm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HPSJM_06750
Prokaryotic type
HPSJM_06750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ADO02914
UniProt:
E1Q1H9
LinkDB
All DBs
Position
complement(1349582..1350283)
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AA seq
233 aa
AA seq
DB search
MKLFDYAPLSLAWREFLQSEFKKPYFLEIEKRYLEALKSPKTIFPKSSNLFYALNLTPPY
AVKIILLGQDPYHSTYLENEQELPVAMGLSFSVEKNAPIPPSLKNIFKELHANLGVPVPC
CGDLSAWAKRGMLLLNAILSVEKNQAASHKHIGWEAFSDRILERLFETISPLIVVLLGKV
AQKKIALIPKNKHIIITAPHPSPLSRGFLGSGVFTSVQKAYRKVYHKDFDFSL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttttgactacgctcctttgagtttggcttggagggagtttttgcaaagcgaa
tttaaaaaaccttatttcttagaaatagaaaaacgctacctagaagccctaaaaagccct
aaaaccattttccccaaaagctctaatctgttttatgcgctcaatctaacgcccccttat
gcggttaaaatcatccttttagggcaagacccctaccattccacctacctagaaaatgag
caagaattgccggtggcgatgggcttaagctttagcgtggaaaaaaacgcccccattcct
ccaagcttaaaaaatatttttaaagaattgcatgcgaatttgggcgtgcctgtgccttgt
tgcggggatttgagcgcgtgggctaaaaggggcatgctgttattgaacgctattttaagc
gtggaaaaaaaccaagccgcttcgcacaagcatattggctgggaagcttttagcgacagg
atattagaacgcctttttgaaacgatctcccctttaatcgtggtgttattagggaaagtc
gcccaaaaaaagatcgcgctaatccctaaaaacaaacacatcatcatcacagcccctcac
cctagcccactatctagggggtttttagggagtggggtttttacaagcgttcaaaaagct
tatagaaaggtttatcataaggattttgatttcagcttgtga
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