Helicobacter pylori 35A: HMPREF4655_21021
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Entry
HMPREF4655_21021 CDS
T01892
Name
(GenBank) hypothetical protein
KO
K23083
3-deoxy-D-manno-octulosonic acid-hydrolase
Organism
hpo
Helicobacter pylori 35A
Pathway
hpo00540
Lipopolysaccharide biosynthesis
hpo01100
Metabolic pathways
Module
hpo_M00867
KDO2-lipid A modification pathway
Brite
KEGG Orthology (KO) [BR:
hpo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HMPREF4655_21021
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hpo01005
]
HMPREF4655_21021
Lipopolysaccharide biosynthesis proteins [BR:
hpo01005
]
Lipid A
HMPREF4655_21021
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BNR_2
DUF3741
Motif
Other DBs
NCBI-ProteinID:
ADU41116
UniProt:
E6S264
LinkDB
All DBs
Position
1007547..1008665
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AA seq
372 aa
AA seq
DB search
MEHSRNRLKHAAFFVGLFIVLFLMIMKRQTPPYAFMHNQTLSTESPPYFTQLTIPKPNDA
LSVHASALISLPNDNLLSAYFSGTKEGARDVKISANLFDSKINRWSEAFVILTKEELSHY
SHEYIKKLGNPLLFLHDNKILLFVVGVSMGGWATSKIYQLESALEPIHFKFVRKLSLSPF
LNLSHLIRNKPLNTTDGGFMLPLYHELATQYPLLLKFDKHNNPRELLRPNALNYQLQPSL
TPFKDCALMAFRNHSLKDSLMLETCKTPTAWQKPMLTNLKNLNDALNLINLNKELYLIHN
PSDSSLRRKELLLSKLENSNSFKTLKILDKANEVSYPSYSLNSHFIDIVYTYNRSHIKHI
RFNMAYLKSLLK
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
ttggaacattcaagaaatcgcctaaaacatgccgcctttttcgtggggctttttatcgtt
ttatttttaatgataatgaagcgccaaacccccccttatgcttttatgcacaatcaaacc
ctttcaaccgaaagccccccctatttcacacaactcactatccctaaaccaaatgacgct
ttaagcgtgcatgcgagcgctttaatcagcttgcctaacgataaccttttgagcgcttat
tttagcggcactaaagaaggggcaagggatgtgaaaatcagcgcgaatctttttgacagc
aagatcaatcgctggagcgaagccttcgttattttaaccaaagaagagctttctcattat
tcgcatgaatatatcaaaaaactaggtaaccccttgctttttttgcatgacaataaaatt
ttgttgtttgtcgtaggggtgagcatgggcgggtgggccacttctaaaatctatcaactt
gaaagcgctttagagccgattcattttaaatttgtgcgaaaactctctttaagccctttt
ttaaacttaagccatttgataaggaacaagcctttaaacaccactgatggcgggtttatg
ctaccgctttatcacgaattagccacccaataccccttattgttaaaatttgacaaacac
aataacccaagagagcttttaaggcctaatgccctaaactatcagctccagccaagccta
accccctttaaagactgcgctctcatggcgtttagaaaccattctttaaaagatagtctc
atgctagaaacctgtaaaacccccaccgcttggcaaaaacccatgcttacgaatttgaaa
aacttgaatgacgctttgaatttgatcaatttaaacaaagaattgtatttgatccacaac
cctagcgattcatctttgcgtcgtaaagaactcttgctttctaaattagaaaactcaaac
tcttttaaaaccttaaaaattttagataaagcaaatgaagtgagttacccaagctatagt
cttaattctcattttatagatattgtttatacctacaaccgctctcatatcaaacacatc
cgttttaatatggcttatttaaaatcccttctcaagtga
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