Helicobacter pylori P12: HPP12_0572
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Entry
HPP12_0572 CDS
T00786
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
hpp
Helicobacter pylori P12
Pathway
hpp00300
Lysine biosynthesis
hpp00470
D-Amino acid metabolism
hpp01100
Metabolic pathways
hpp01110
Biosynthesis of secondary metabolites
hpp01120
Microbial metabolism in diverse environments
hpp01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
hpp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HPP12_0572 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HPP12_0572 (dapF)
Enzymes [BR:
hpp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HPP12_0572 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
ACJ07726
UniProt:
B6JLE8
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All DBs
Position
complement(603019..603837)
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AA seq
272 aa
AA seq
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MVFYKYSGSGNDFLITQSFKKKDFSNLAKQVCHRHEGFGADGLVIVLPSKDYDYEWDFYN
SDGSKAGMCGNASRCVGLFAYQHAIAPKEHVFLAGKREISICIEEPNIIESNLGNYKILD
TIPNLRCKKFFTNNSVLENILTFYLIDTGVPHLVGFVKNKEWLNSLNTLELRALRHAFNA
NINIAFIENEETIFLQTYERGVEDFTLACGTGMAAVFIAARLFYNAPKKATLIPKSNESL
ELSLKNDGIFYKGIVRYIGMSVLGSVFENGCF
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggtgttttacaaatattcagggagtgggaatgattttttaatcacgcaaagttttaaa
aaaaaagatttttcaaatttagccaagcaggtgtgccataggcatgagggttttggggct
gatgggcttgtaattgtcttaccgagtaaagattatgattacgaatgggatttttacaat
tcagacggctctaaagctggcatgtgtgggaatgcgagccgttgcgtggggttatttgcc
taccaacatgctatagcccctaaagagcatgtttttttagccggaaaaagagagatttct
atttgcatagaagagcccaatattatagagagcaatctcggtaactacaaaatcctagac
accatacccaatttaagatgcaaaaaattttttactaataacagcgttttagaaaatatc
cttactttctatctcatagatacaggagtgccgcatttagtggggtttgtgaaaaataaa
gagtggttaaattcccttaacacgctggaattaagggctttaaggcatgcgtttaacgct
aatattaacatcgcttttatagaaaatgaagagacgatttttttacaaacttatgaaaga
ggggttgaagatttcacgctagcttgcgggacaggcatggcagcggtttttatcgccgcg
cgccttttttataacgcacctaaaaaagccactctcatccctaaaagcaacgaatcttta
gagctttctttaaaaaatgatgggattttttataaaggaatcgtgcgttatattggcatg
agcgttttgggcagtgtttttgaaaatgggtgtttttga
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