Helicobacter pylori 2017: hp2017_0480
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Entry
hp2017_0480 CDS
T01913
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
hpq
Helicobacter pylori 2017
Brite
KEGG Orthology (KO) [BR:
hpq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpq03032
]
hp2017_0480 (gyrB)
03400 DNA repair and recombination proteins [BR:
hpq03400
]
hp2017_0480 (gyrB)
Enzymes [BR:
hpq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
hp2017_0480 (gyrB)
DNA replication proteins [BR:
hpq03032
]
Prokaryotic type
DNA Topoisomerases
hp2017_0480 (gyrB)
DNA repair and recombination proteins [BR:
hpq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
hp2017_0480 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ADZ49571
LinkDB
All DBs
Position
477301..479622
Genome browser
AA seq
773 aa
AA seq
DB search
MQNYQSHSIKVLKGLEGVRKRPGMYIGDTNIGGLHHMVYEVVDNAVDESMAGFCDTINIT
LTDEGSCIVEDNGRGIPVDIHPTEKIPACTVVLTILHAGGKFDNDTYKVSGGLHGVGVSV
VNALSKRLIMTIKKEGQIYRQEFEKGIPISELEIIGKTKSAKESGTTIEFFPDESVMEVV
EFQAGILQKRFKEMAYLNDGLKISFKEEKTQLQETYFYKDGLKQFVKDSTKKELLTPIIA
FKSMDEETRTSIEVALAYADDYNENTLSFVNNIKTSEGGTHEAGFKMGLSKAILQYIDNN
IKTKESRPISEDIKEGLIAVVSLKMSEPLFEGQTKSKLGSSYARALVSKLVYDKIHQFLE
ENPNEAKIIANKALLAAKAREASKKARELTRKKDNLSVGTLPGKLADCQSKDPLESEIFL
VEGDSAGGSAKQGRDRVFQAILPLKGKILNVEKSHLSKILKSEEIKNMITAFGCGIQEGF
DIERLRYHKIIIMTDADVDGSHIQTLLMTFFYRYLRPLIEQGHVYIAQAPLYKYKKGKTE
IYLKDSVALDHFLIEHGINSVDIEGIGKNDLMNLLKVARHYRYTLLELEKRYNLLEVLRF
LIETKDALSLDMKVLEKSILEKLEGLNYQILRSFATEESLHLHAQTPKGLVEFNLDDNLF
KEVLFEEANYTYQKLMEYNLDFLENKDILAFLEEVENHAKKGANIQRYKGLGEMNPNDLW
ETTMHKENRSLIKLKIEDLEKTDAIFSLCMGDEVEPRRAFIQAHAKDVKQLDV
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattaccagagccatagtattaaggttttaaaaggcttagagggggttaggaaa
cgacctggaatgtatattggcgataccaatataggcgggttacaccacatggtgtatgaa
gtcgtggataacgctgtagatgagagcatggcgggtttttgcgatacgatcaacatcact
ttgactgatgagggttcatgcattgtagaagataacgggcgaggcattcctgtagacatt
caccccacggaaaaaatccccgcttgcaccgtggttttaacgattttgcatgcggggggc
aagtttgataatgacacttataaagtttcaggcggtttgcatggcgtgggcgtttcggtt
gtgaacgctttgagcaaacgcttgatcatgaccattaaaaaagagggtcaaatctatcgc
caagagtttgaaaagggtatccccattagcgagcttgaaatcattggcaagactaaaagc
gctaaagaaagcggcacgactattgaatttttccctgatgaaagcgtgatggaagtcgtt
gaatttcaagcgggtattttacaaaagcgcttcaaagaaatggcgtatcttaacgacggc
ttaaaaatttctttcaaagaagaaaaaacccaactgcaagagacttatttctataaagac
ggcttgaaacaattcgtgaaagacagcactaaaaaagaattgctcacccccattatcgcg
tttaaaagcatggatgaagaaacgcgcacttctatagaggtcgctttagcgtatgctgat
gattacaatgaaaacaccttaagctttgtgaataacattaaaacttctgagggcggcacg
catgaggcgggctttaaaatgggcttgtctaaagcgattttgcaatacattgacaataat
attaaaaccaaagagtcgcgccccatttctgaagacattaaagagggcttgatcgctgtt
gtgagcttgaaaatgagcgagcctttatttgaggggcagactaaatccaaactcggcagc
tcatatgcgcgcgcgttggtttcaaaattagtctatgacaaaatccatcagtttttagag
gaaaaccctaacgaagcgaaaatcatcgccaataaagccctactagctgcaaaagccaga
gaagccagcaagaaagccagagagcttacaaggaaaaaggataatttgagtgttggcact
ttgcctggaaaattagccgattgccagagcaaagacccgcttgagagtgaaatcttttta
gtggagggcgatagcgcgggcgggagcgctaaacaagggcgtgatagggttttccaagcg
atcttgcccttaaaaggtaagattttaaatgtggaaaaaagccatttgtcaaagattcta
aaatcagaagaaattaaaaatatgatcacggcttttgggtgcggcattcaagagggtttt
gatatagaaagattgcgctatcataaaatcattatcatgaccgatgctgatgtggatggg
agccatatccaaaccttgctgatgacttttttctatcgttatttacgcccattgattgaa
caagggcatgtttatatcgctcaagcccctctttataaatacaagaaaggcaaaacagaa
atttatcttaaagacagcgtcgctttggatcattttttaattgagcatggcatcaattcg
gtggatattgaagggattggcaagaacgatttgatgaatttgttaaaagtggcacgccat
taccgctatacgcttttggaattagaaaaacgctacaacttgctagaagttttacgcttt
ttgattgagactaaggacgccttaagccttgatatgaaagttttagaaaaaagcatttta
gaaaaattagagggcttgaattatcagatcttacgctcttttgccactgaagaaagcttg
catttgcacgcacaaacccctaaaggcttggtggaatttaacctagatgacaacctcttt
aaagaagtgttgtttgaagaagcgaattacacttatcaaaagcttatggagtataattta
gatttcttagaaaataaggatattttggcgtttttagaagaagtggaaaaccacgctaaa
aagggagcgaatatccagcgctataagggactgggcgagatgaaccctaatgatttatgg
gaaacgaccatgcataaagaaaaccgcagcttaatcaaactcaaaattgaagatttagaa
aaaaccgatgcgatcttttcgctttgcatgggcgatgaagtagagcctagaagagccttt
atccaagcgcatgctaaagatgtgaagcaactagatgtgtaa
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