Helicobacter pylori Shi470: HPSH_03975
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Entry
HPSH_03975 CDS
T00742
Name
(GenBank) hypothetical protein
KO
K23083
3-deoxy-D-manno-octulosonic acid-hydrolase
Organism
hps
Helicobacter pylori Shi470
Pathway
hps00540
Lipopolysaccharide biosynthesis
hps01100
Metabolic pathways
Module
hps_M00867
KDO2-lipid A modification pathway
Brite
KEGG Orthology (KO) [BR:
hps00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HPSH_03975
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hps01005
]
HPSH_03975
Lipopolysaccharide biosynthesis proteins [BR:
hps01005
]
Lipid A
HPSH_03975
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BNR_2
DUF3741
Motif
Other DBs
NCBI-ProteinID:
ACD48230
LinkDB
All DBs
Position
776579..777697
Genome browser
AA seq
372 aa
AA seq
DB search
MEHSRNRLKHAAFFVGLFIVLFLIIMKRQTPPYAFMHNQTLSTKNPPYFTQLTIPKPDGA
LSVHASALISLPNDNLLSAYFSGTKEGARDVKISANLFDSKINRWSEAFIILTKEELSHY
SHEYIKKLGNPLLFLHDDKILLFVVGVSMGGWATSKIYQFESALEPIHFKFVQKLSLSPF
LNLSHLIKNKPLSTTDGGFMLPLYHELATQYPLLLKFDKHNNPRELLRPNALNHQLQPSL
TPFKDCAVMAFRNHSLKDCLMLETCKTPTAWQKPMLTNLKNLNDALNLINLNKELYLIHN
PSDSSLRRKELLLSKLENSNSFKTLKILDKANEVSYPSYSLNSHFIDIVYTYNRSHIKHI
RFNMTYLKSLLK
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
ttggaacattcaagaaatcgcctaaagcatgccgccttttttgtggggctttttatcgtt
ttatttttaattataatgaagcgccaaacccccccctatgcttttatgcacaatcaaacc
ctttcaaccaaaaacccaccctatttcacacagctcactatccctaaaccagatggtgct
ttaagcgtgcatgcgagcgctttaatcagcttgcctaacgataaccttttgagcgcttat
tttagcggcactaaagaaggggcaagggatgtgaaaatcagcgcgaatctttttgacagc
aagatcaatcgctggagtgaagccttcatcattttaaccaaagaagagctttctcattat
tcgcatgaatatatcaaaaaactaggtaaccccttgctttttttgcatgacgataaaatt
ttgttgtttgtcgtaggggtgagcatgggcgggtgggccacttctaaaatctatcaattt
gaaagcgctttagagccgattcattttaagtttgtgcaaaaactctctttaagccctttt
ttaaacttaagccatttgataaaaaataagcctttaagcaccactgatggagggtttatg
ctaccactctatcacgaattagccacccaataccccttattgttgaaatttgacaaacac
aataacccaagagagcttttaaggcctaatgccctaaaccaccagcttcagccaagccta
accccctttaaagactgtgctgtcatggcgtttagaaaccattctttaaaagattgcctc
atgctagaaacctgtaaaacccccaccgcttggcaaaaacccatgcttacgaatttgaaa
aacttgaatgacgctttgaatttgatcaatttaaacaaagaattgtatttgatccacaac
cctagcgattcatctttgcgccgtaaagaactcttactttctaaattagaaaactcaaac
tcttttaaaaccttaaaaattttagataaagcaaatgaagtgagttacccaagctatagt
cttaattctcattttatagatattgtctatacctacaaccgctctcatatcaaacacatc
cgttttaatatgacctatttaaaatcccttctcaagtga
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