Hydrogenophaga pseudoflava: HPF_04225
Help
Entry
HPF_04225 CDS
T06073
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
hpse
Hydrogenophaga pseudoflava
Pathway
hpse02024
Quorum sensing
hpse03060
Protein export
hpse03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hpse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HPF_04225 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HPF_04225 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HPF_04225 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hpse02044
]
HPF_04225 (ffh)
Enzymes [BR:
hpse01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HPF_04225 (ffh)
Secretion system [BR:
hpse02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HPF_04225 (ffh)
Eukaryotic Sec-SRP protein
HPF_04225 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
APS_kinase
AAA_16
AAA_30
AAA_22
AAA_33
cobW
GTP_EFTU
AAA_18
AAA_17
AAA_14
nSTAND3
AAA_31
ResIII
AAA_19
Thymidylate_kin
AAA_28
AAA_24
YqeC
Helicase_RecD
T2SSE
TsaE
ArsA_ATPase
KTI12
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
QBM26877
UniProt:
A0A4P6WTW2
LinkDB
All DBs
Position
853070..854440
Genome browser
AA seq
456 aa
AA seq
DB search
MASALSDRLSRIVKEMRGQARITESNVTDMLREVRMALLEADVALPVVRDFIARVKEKAL
GQDVVGSLTPGQVLVSVVNRELAATMGDGVSDINLAAQPPAVILMAGLQGAGKTTTTAKL
AKHLIEKRKKKVLTVSGDVYRPAAIEQLKTVTAQAGAEWFPSSPDQKPLDIARAALDYAK
KHYVDVLLVDTAGRLAIDEALMREIQELHGALNPVETLFVVDAMQGQDAVNTAKAFKDAL
PLTGIILTKMDGDSRGGAALSVRQVTGAPIKFAGVSEKIDGLEVFDAERHAGRILGMGDI
VALVEQVTAGVDMAAAQKLAAKVKSGGDFDLNDFLDQLRQMKQMGGLSSLMDKLPGNLAA
KASEADLSRAEKDIKRKEGIICSMTPKERSKPDLIKATRKRRIAAGAGVHVQEVNRLLKE
FEQMQGMMKKMKGGGLMKMMKRMGGMKGMPKLPGMG
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagccctttccgaccgcctgtcacgcatcgtcaaggaaatgcggggccaggcc
cgcatcaccgagagcaacgtcaccgacatgctgcgcgaggtgcgcatggccctgctggag
gccgacgtggcgctgccggtggtgcgcgatttcatcgcccgcgtgaaggaaaaggccctg
ggccaggacgtggtgggttcgctcactcccgggcaggtgctggtcagcgtggtcaaccgc
gaactggcggccaccatgggcgatggtgtgtcggacatcaacctggcggcccagccgccc
gcggtgatcctcatggcgggcctgcagggcgctggcaagaccacgaccaccgccaagctg
gccaagcacctgatcgagaagcgcaagaaaaaagtgctgaccgtctcgggcgacgtctac
cgaccggccgccatcgaacagctcaagacggtgacggcgcaggccggggccgagtggttc
ccgagttcacccgaccagaagccgctggacatcgcccgggccgcgctggactacgcgaaa
aagcactatgtcgacgtgctgctggtcgacaccgccggccgtctggcgattgacgaagcg
ctgatgcgcgagatccaggaattgcatggcgcgctgaaccccgtcgaaaccctgttcgtg
gtcgacgccatgcagggccaggacgcggtcaacaccgccaaggccttcaaggacgcgctg
ccgctgaccggcatcatcctgaccaagatggacggcgactcgcgcggcggcgcggcgctg
tcggtgcgtcaggtcacgggtgcgccgatcaagttcgccggtgtgagcgagaagatcgac
ggcctggaggtgttcgacgccgagcgccacgccggccgcatcctgggcatgggcgacatc
gtggccctggtcgagcaggtcaccgccggcgtggacatggcggcagcgcagaagctggca
gccaaggtcaagagcggtggcgacttcgacctcaacgactttctcgaccagttgcggcag
atgaagcagatgggtggcctgtccagcctgatggacaagctgcccggcaacctggccgcc
aaggccagcgaggccgacctcagccgcgccgagaaggacatcaaacgcaaggagggcatc
atctgcagcatgacgcccaaggagcgcagcaagcccgatctcatcaaggccacgcgcaag
cgccgcatcgccgccggtgccggtgtgcatgtgcaggaagtcaaccgcctgctcaaggaa
ttcgagcagatgcagggcatgatgaaaaagatgaagggcggcggtctgatgaagatgatg
aagcgcatgggcggcatgaagggcatgcccaagctgcccggcatgggttga
DBGET
integrated database retrieval system
