Hydrogenophaga pseudoflava: HPF_13505
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Entry
HPF_13505 CDS
T06073
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
hpse
Hydrogenophaga pseudoflava
Pathway
hpse00541
Biosynthesis of various nucleotide sugars
hpse01100
Metabolic pathways
hpse01250
Biosynthesis of nucleotide sugars
Module
hpse_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
hpse00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HPF_13505 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hpse01005
]
HPF_13505 (kdsB)
Enzymes [BR:
hpse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
HPF_13505 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
hpse01005
]
Lipid A
HPF_13505 (kdsB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
Motif
Other DBs
NCBI-ProteinID:
QBM28713
UniProt:
A0A4V1ABP8
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All DBs
Position
2823024..2823806
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AA seq
260 aa
AA seq
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MSAAVRTPAFSVLIPARMASSRLPDKPLADIAGLPMVVRVARQALLSGARQVVVAADDPR
ILSACAEHGVTALLTRSDHPSGSDRLAEACELLGLADDELVVNVQGDEPLVDPALIAAVA
TQLAQRPDCVMSTAAHAIEQVEDFLNPNVVKVVLDRRQVALYFSRAPIAWWRDGMSNGQP
LSLPSPAPWRHIGVYGYRAGFLRRFPSLEPAPLELTESLEQLRTLWHGERIAVHLATHAA
APGVDTPTDLERVRALLRKS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggctgtccggacaccggccttcagcgtgctgattccggcgcgcatggcctcc
agccgcctcccggacaaacctctggcagacattgcgggcctgcccatggttgttcgtgtg
gcccggcaggcgctgctcagcggcgcccgccaggtggtggtggcggccgacgatccccgc
atcctgagcgcctgtgcggagcatggcgtcacggcgctgctcacccgttccgaccacccc
tccggcagcgaccggctggccgaagcctgtgaactgcttggcctggctgacgacgagctc
gtggtgaatgtgcagggggacgagccgctggtggaccccgcgctcattgccgcagtggcc
acgcagctggcgcaaaggcccgattgcgtgatgagcaccgccgcccacgccattgagcag
gtggaagactttctcaatccgaacgtggtcaaggtggtgctcgaccggcggcaggtggcg
ctgtatttcagccgcgcgcccatcgcctggtggcgcgacggcatgtcgaacggccagccg
ctcagcctgccttctccggccccttggcggcacatcggcgtctacggataccgggcgggt
ttcctgcgccgttttccgtcgctggagccggcaccgctggaactgacggagtcgctggag
caactgcgcaccctatggcacggtgagcgcattgcggtgcatctcgcgacccatgcggcc
gctcccggtgtggacacccccacggacctggaaagggtccgggcgctgctccggaagtct
tga
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