Henckelia pumila: 140862581
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Entry
140862581 CDS
T11037
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3-like
KO
K03265
peptide chain release factor subunit 1
Organism
hpum Henckelia pumila
Pathway
hpum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140862581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpum03019
]
140862581
03012 Translation factors [BR:
hpum03012
]
140862581
Messenger RNA biogenesis [BR:
hpum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
140862581
Translation factors [BR:
hpum03012
]
Eukaryotic type
Release factors
140862581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
She2p
Motif
Other DBs
NCBI-GeneID:
140862581
NCBI-ProteinID:
XP_073121707
LinkDB
All DBs
Position
4:complement(228516471..228520108)
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AA seq
437 aa
AA seq
DB search
MADGQENDKNIEIWKIKKLIKALESARGNGTSMISLIIPPGDQISRITKMLAEEYGTASN
IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTFDFMPFKPIN
ASLYLCDNKFHTEPLTQLLESDEKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKFFEEISQDTG
KYVFGVDDTIKALEMGAVEILIVWENLDINRYMLKNSTTSEIVIKYLNKDQETDQSNFKD
SNTSAELEVQDKMPLLEWFANEYKNFGCSLEFVTNRSQEGSQFCRGFGGIGGVLRYQLDM
RSFDEPSDEGEIYEDSD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcagatggtcaagaaaatgataagaatattgaaatatggaaaataaaaaaattgatt
aaggctcttgaatctgctagaggaaatggtaccagcatgatatccctgatcattccgcct
ggtgatcaaatatcccggatcactaaaatgctggctgaggaatatgggacagcttcaaat
attaaaagcagggtgaatcgtcaatctgtgttgggtgcaatcacatctgctcagcaaagg
cttaaactgtataacaaggtaccccctaatggattagtgctttataccggaactatagtg
actgatgatggaaaagaaaagaaggtgaccttcgacttcatgcctttcaaacccataaat
gcttctttatacctgtgcgacaataaatttcacactgaacctcttactcaactcctagaa
tctgatgagaaatttggatttattgtaatggatggaaatggaaccctttttgggaccctg
agtggtaacactagagaagtgctccacaagttcacagttgatcttccaaaaaaacatgga
agaggtggacaatcagcccttcgatttgctcgtcttcgaatggagaagcgccacaactat
gtaaggaagactgcagagcttgctactcaattctttattaatcctgctaccagccagccg
aatgtatcaggtctaatacttgctggttcagctgatttcaagaccgagctgagtcaatct
gatatgtttgatcctcgccttcaggccaagatactaaacgtggtagatgtctcatatggg
ggagaaaatggtttcaatcaggccattgaattgtctgctgaaattctgtccaatgtgaag
ttcattcaagaaaagcgtctgatagggaaattctttgaagaaatcagtcaagacactgga
aaatatgtatttggtgtggacgacaccataaaagctttggagatgggagctgtcgaaata
ttgattgtgtgggaaaacttggatatcaaccgttatatgcttaaaaacagtacaaccagt
gagattgtcataaaatatttaaataaggatcaagaaactgatcagagcaacttcaaggat
tcaaatacctctgctgagttagaggttcaagacaaaatgcctctgcttgagtggtttgca
aatgaatacaaaaattttggctgttcacttgagtttgtcactaatagatctcaagaaggc
tctcagttctgccgaggctttggtggaattggaggagttcttcgctaccagctggacatg
cgatcttttgatgagccatccgatgaaggagaaatttacgaggattcggattag
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