Henckelia pumila: 140866433
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Entry
140866433 CDS
T11037
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hpum Henckelia pumila
Pathway
hpum00040
Pentose and glucuronate interconversions
hpum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140866433
Enzymes [BR:
hpum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
140866433
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
DUF4131
Motif
Other DBs
NCBI-GeneID:
140866433
NCBI-ProteinID:
XP_073127520
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Position
4:9697548..9702202
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AA seq
452 aa
AA seq
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MATGVSGKWLRPLFSLLLLLLLLFVGAMARVHQKETKNFRAVEKEQLQSSPNSTMAARSE
GIDEGALNEHAVADPEEVAKIVEIATRNSTEGRKLGYLSCGTGNPIDDCWRCDPNWHNNR
KKLADCGIGFGRNAVGGRDGRFYVVTDPGDDDPVNPRPGTLRHAVIQEEPLWIVFKRDMI
ITLKQELIMNSFKTIDGRGVNVHIANGGCVTVQYITNVIIHGLHIHDCKPTGNAMVRSSP
SHYGWRSMADGDAISIFGSSHIWVDHNSLSNCADGLVDAVMGSTAITISNNYFTHHNEVI
LLGHSDSYVKDKQMQVTIAYNHFGEGLIQRMPRCRLGYFHVVNNDYTHWEMYAIGGSANP
TINSQGNRYLAPTNPFAKEVTKRVDTAESQWKGWNWRSAGDLMLNGAYFTPSGAGASASY
ARASSLGAKSSTMVGSITSGAGVLGCRLGSQC
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgggagtttccggaaaatggctgcggcctctgttttctttgctgcttttgctg
ctcctgcttttcgtcggagcaatggcgagagttcaccaaaaggaaactaaaaatttcaga
gctgtggaaaaagagcagttgcagagctctccgaactcgacaatggcggcgaggtcggaa
ggaattgatgagggtgctttgaatgagcatgcggtggctgacccggaggaggttgccaaa
atagttgaaatagccactcggaacagcacggaggggcgaaaacttggatatttatcttgt
ggaactggtaaccctattgatgactgctggcgttgtgatcctaattggcataataaccgc
aagaaacttgctgactgtggtattggttttgggcgcaatgccgttggtggacgtgatggc
cgattctatgttgtcaccgatcccggtgatgatgaccctgtcaacccccggcccggcact
ctacgtcatgctgttatccaggaggagcctctttggatcgtgttcaagcgcgacatgata
ataactttgaagcaagagctcataatgaacagctttaagaccatagatggtcgcggagtc
aatgtgcacattgctaatggagggtgcgtcacagtccaatacattaccaatgtgatcatt
catggactgcacattcacgactgcaagccaacagggaacgcgatggtgcggagctctcca
tcacattatggttggaggtcgatggcggatggtgatgccatttccatctttggctcgagc
catatttgggtcgatcataactcactctctaactgtgctgacggccttgtagatgctgtc
atgggctctactgccattaccatttcaaacaattactttacccatcataatgaggttatt
ctgttgggtcatagcgattcttatgttaaagacaagcagatgcaagtgaccatcgcctat
aatcatttcggggaaggcctcattcagagaatgccaaggtgcagacttggatacttccac
gttgtgaacaatgactacactcattgggagatgtatgccatcggtggaagcgcgaacccc
accatcaacagccaaggcaacagataccttgcaccaaccaatccttttgcaaaagaggtg
acgaagagggtagacacagctgagagtcaatggaagggttggaactggagatcagcaggt
gacctgatgttgaatggagcttatttcactccgtccggagccggagcttcggccagctat
gccagagcttcaagcttaggggccaagtcttccaccatggttggatctatcacttccggt
gctggagttcttggttgccggctcggcagccagtgctaa
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