Henckelia pumila: 140886704
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Entry
140886704 CDS
T11037
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
hpum Henckelia pumila
Pathway
hpum03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
140886704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpum03032
]
140886704
Enzymes [BR:
hpum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
140886704
DNA replication proteins [BR:
hpum03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
140886704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
LIP-1
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
140886704
NCBI-ProteinID:
XP_073149526
LinkDB
All DBs
Position
3:202808301..202823571
Genome browser
AA seq
1603 aa
AA seq
DB search
MADEEPVEGRRRTRGPAATARSEALQRLKALRSGGRRELESGGFQIKMEEPIYDTVDEDQ
YEALVAKRREEAKGFIVDDNGLGYGDEGEEEDWSLAGASFSSEESEGESDRRKRKKSNGN
DDADKKARDVVKKPSALASAAALMGKQKISNMFTSSVFKKDKQKNLACDSIVDNVIAEFA
PDETDKERRRRGNISNLSFNNSKNSASPHGGVLPVKIKIEKPVFGSISPDTRIKINGGHQ
DVPDGESWKCYTEEVEMMRSKEMSFDIAEKGVSSSDKIVNERRNEKSEATEDGKEDKECL
IKNEVKEKDGSSVKEIGKKVSTLNAKIEEPRDPALSATMGWQAVRSAGQNSTADCNESGR
GMNQNLTSQEKMDFELESDGSLSFYILDAYEEIYGANAGNIYLFGKVKAGAAYHSCCVVV
KNSHRCIYAIPTFSFAHTDTIAELEKNVEKSQMTLMAFKDTIAKQGRDGEKSGMSPTDLK
DRITKLEKDVVESRTALRVRLHELASDLKSEMAKKLLECNTSSFSMAPVKRNYAFERSDI
PYGDNYVLKINYPFKDPPLPSDSKGNNFRALLGTHNSGLELFLIKRKIKGPSWLSVSKFS
SCSAPQRVSWCMFEVTVDSPKDIQVAASSKNITELPPVVVAAINLKTIINEKHNTNEIVS
ASVICCHKAKIDIPMLGSEWTRLGVLSHFTVVRKLDGGIFPMGFTKEATDKNAKAGSNVI
CYESSERALLNRLMIELYKLDSDVLVGHNISGFDLDVLLHRVQACKVPSNMWSKIGRLKR
SVMPKLNKGNSIFGSGASSGIMSCIAGRLLCDTYICARDLLKEVSYSLTQLAKTQLKKDR
KEITPHDIPQMLQRSESLMELIEYGETDAWLSMELMFHLSVLPLTRQLTNISGNLWHKTL
QGARAQRVEYLLLHAFHAKKFMVPDKFSVQSKEIKTTKRKINGAEDGDIDKDDTNLDDEP
PENNHGKSKKGPSYSGGLVLEPKKGLYDKYVLLLDFNSLYPSIIQEYNICFTTVNKSADG
SVSRLPSSKKTGVLPELLKNLVERRKMVKSWLKTASGLKVQQLDIQQQALKLTANSMYGC
LGFSNSRFYAKALAELITLQGREILQSTVDLVQNTLNLEVIYGDTDSIMIYSGLDDVGKA
KLIAGKVIQEVNKKYRCLEIDLDGLYKRMLLLKKKKYAAVKLQFKDGTPYEVIERKGLDM
VRRDWSLLSKEMGDFCLSRILSGGSCEDVVEEIHNSLVKVQEEVRNGQIPLEKYVITKTL
TKPPEAYPDARNQPHVEVALRLKRQGYVTGCSSGDTVPYIICAEQGNNSSTSMGIAQRAR
HPDELKGDNQNWIIDIDYYLAQQIHPVISRLCASIQGTSPSRLADCLGLDSSKFHNKFND
SVRNDPSSSMLSTFDDGERYRGCQPLVLSCPSCFSTFECSPILSSVCASINPMPADIEAG
SSVNKFWQRLWCPNCPEEGDTGRIYPALIANQVKKQAEGFMSTYYRGIMMCDDETCNYTT
RSVNLRLLGDSERGTSCPNYPRCNGHLLRKYTEADLYRQLTYFCYILDTSRHIDKIEVNK
RLAVEKELSRIRPLVDAASTTVQKIRDRCAYGWVDLKDLLVIV
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgaggagccggtggaggggaggaggcggacccgtggtcctgccgcgacggcg
cgttcggaagcactacagcgtctcaaggctcttcgcagcggtggccgtcgtgagctcgaa
tctggaggcttccagattaagatggaggaaccgatttatgacacggtggatgaagaccag
tacgaagctctagtcgcgaagcgccgcgaggaagccaaagggtttatagtagacgacaac
ggtctagggtacggtgatgaaggtgaggaagaagactggtcgctcgctggcgcctccttt
tcttcagaagaatctgagggagaatccgataggcggaaaagaaagaaaagtaatggaaat
gatgacgcggataagaaggccagggacgttgtgaaaaagccttcggcgttggcatcagcg
gcagcattgatgggtaagcagaagatttctaatatgtttacttcctctgtgtttaaaaaa
gataaacagaagaacttagcatgtgatagtattgttgataatgtgattgctgagtttgca
cccgatgagactgataaggagaggagaaggagaggtaacattagtaatttgagttttaac
aattccaaaaattccgcttctccccatggaggggttttaccagttaaaattaaaattgag
aagcccgtctttggaagcattagtccagatactagaattaaaataaatggaggtcatcaa
gacgtcccggatggagagtcatggaagtgctataccgaggaagttgaaatgatgagaagt
aaggagatgagcttcgacatcgcagaaaaaggagttagttcatctgataaaatagtgaac
gagaggagaaatgagaagagtgaagctactgaggatggaaaggaggacaaagaatgtttg
ataaaaaatgaagtcaaggagaaggatggatcatctgttaaagagattgggaaaaaagtg
tctactcttaatgcaaaaattgaagagccaagagatccagctttgagtgccacaatgggg
tggcaggccgtgagaagtgcagggcaaaattcaactgctgattgtaacgaatctgggcgt
gggatgaatcagaacttaaccagccaggaaaaaatggactttgaattggagtctgatgga
tcgttgtctttctacatacttgatgcatatgaggagatttatggtgctaatgctgggaat
atttatctctttggaaaggtcaaagctggagctgcatatcacagttgttgtgtggtcgta
aagaactcgcatagatgcatatatgccatcccaaccttttcttttgcacacactgacaca
atcgcagagctagagaaaaatgttgagaagtctcaaatgactctaatggctttcaaagac
acaattgcaaagcaagggagagatggggaaaagtcaggaatgtcaccaacagatctcaaa
gatagaatcactaagctagaaaaggatgttgtagagtctcgaacagctttacgagttcgg
cttcatgaattggcgtctgacttgaagtccgaaatggcaaaaaagttgctggagtgtaac
acttcaagttttagcatggcacctgttaagagaaactatgcatttgagagatcagacata
ccttatggggataactatgtcctcaagatcaattatccattcaaggatccaccgcttcca
tcggattctaagggaaacaacttccgtgctttgcttggaactcataacagtggcttggag
cttttcctaatcaaaagaaaaattaaagggccatcgtggctatcggtatcgaaattctcc
agctgctctgctcctcaacgggtgagctggtgtatgtttgaggttactgttgacagtcca
aaggatattcaagttgcagcttcctcgaagaatataacagaattacctcctgttgttgtt
gcagcaataaatttgaaaactatcatcaatgagaaacacaatacaaatgaaattgtgtct
gcttctgtcatttgctgccataaggctaagattgatattcccatgttgggctcggaatgg
actcgtttgggtgtgcttagtcactttacggttgtgcggaaacttgatggtggcatattt
ccaatgggttttacaaaggaggcaactgacaaaaatgccaaggcagggtcaaacgtgatt
tgctatgaaagcagtgaaagagctttattgaatcgattgatgattgagttgtacaaattg
gacagcgatgtgctagttgggcacaacatatctgggtttgacttggatgtccttcttcac
agagtgcaggcatgcaaggttcccagcaatatgtggtccaaaataggccgtctcaagcgc
tctgtgatgcccaaactcaacaaaggaaactccatattcggctcaggggcaagttcagga
atcatgtcatgcattgctggtcgactcttatgtgacacttacatctgtgctcgtgaccta
ttaaaagaggtcagctattccttgacacagttagcaaagacgcaactgaaaaaggataga
aaggagataactcctcatgatattcctcaaatgcttcaaagatctgagtcgctcatggaa
cttattgagtatggggagacagatgcgtggttatcaatggaactcatgttccatttgagt
gttcttcccctcacacgacagctgacaaatattagtggcaatctttggcacaaaactctt
cagggtgctagagctcaaagagtggaatatctcttgttgcatgcgttccatgctaagaaa
tttatggtaccggacaagttttccgttcaatccaaggaaataaagacaacaaaacgtaaa
ataaatggtgcggaagacggagatattgacaaagatgatacaaatttggatgatgagcct
ccagagaataatcatggaaaaagcaaaaagggtccttcctattctggtggattagtgcta
gagccaaagaaaggactatatgacaagtatgtattacttctggatttcaacagtctttac
ccttctattattcaggaatacaatatatgtttcacaactgttaacaaatcggctgatgga
tctgtttcccgtttaccatctagtaaaaagactggagttcttccggagttgttaaagaat
ttggtggagagacggaaaatggtgaaatcatggttaaaaacagcatcaggtctcaaggtt
cagcaacttgacatacagcaacaagctctaaagctgacagctaatagcatgtatggatgc
ctggggttttcgaactccagattctatgcaaaagcacttgcagaacttataacactacaa
ggaagggaaattttacagagcaccgttgatcttgttcaaaatacgctgaacttggaggtt
atttatggtgacacagattcaataatgatctacagcggactcgatgatgttggaaaagct
aaattaattgcaggaaaagtcattcaagaggtcaacaaaaaatacaggtgtttggagatt
gaccttgatgggttgtacaagagaatgttattgctcaagaagaagaaatatgctgctgtc
aaattgcaatttaaagatggcacgccctacgaggttattgagcggaaagggcttgatatg
gtacgtcgtgactggagcttgctgtcaaaggaaatgggagatttctgcctcagtcgaata
ttatctggagggtcttgtgaggacgtggttgaagaaatacacaattctctagtgaaggta
caagaggaagtgaggaatggacagataccgttagaaaaatatgtgatcaccaagacacta
accaaaccacctgaagcatatcctgatgctagaaatcagcctcacgtagaggtagcactt
aggctgaagagacaaggttatgttactggttgttcttctggagatacagtaccctatata
atttgtgctgagcagggaaataattcaagcacctctatgggaattgcccagagggcaagg
catcctgatgaactgaaaggagacaatcagaactggataattgacattgattattatctg
gcacagcagattcatcctgtgatatcacgcctctgtgcatcaatacagggtacaagtcca
tcacgtttggctgattgtttggggcttgattcatcaaagttccataacaaattcaatgat
tctgtccgcaatgatccttccagctcgatgttaagtacatttgatgatggagagagatat
cgaggttgtcaaccgctggtcttatcgtgccccagttgcttcagcacctttgaatgctcc
cctattttgagctcagtgtgcgcgtcaatcaatccaatgccagcagatatcgaagctgga
tcatcagtcaataaattctggcagaggctgtggtgtccaaactgtccagaagaaggtgat
acagggagaatatatcctgctctcatagctaaccaggttaaaaagcaagcagaaggattt
atgtcaacatattaccggggcataatgatgtgtgatgatgaaacttgcaactacactacc
cgtagtgtgaaccttcgactacttggggattccgagagaggaacctcttgtccaaattat
ccacgctgtaatgggcatctcttaagaaagtatactgaagcagatttataccggcagcta
acctacttctgctacattttggatacatcacgccacattgacaagatagaagttaacaaa
agattggctgtggagaaagaactgtccagaattcggcctctggttgacgccgcatcaaca
acagtgcagaaaatccgagataggtgcgcttatgggtgggttgatcttaaagacttgttg
gttatcgtttag
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