Helicobacter pylori v225d: HPV225_0504
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Entry
HPV225_0504 CDS
T01899
Symbol
glcD
Name
(GenBank) glycolate oxidase, subunit GlcD
KO
K00104
glycolate dehydrogenase FAD-linked subunit [EC:
1.1.99.14
]
Organism
hpv
Helicobacter pylori v225d
Pathway
hpv00630
Glyoxylate and dicarboxylate metabolism
hpv01100
Metabolic pathways
hpv01110
Biosynthesis of secondary metabolites
hpv01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
hpv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HPV225_0504 (glcD)
Enzymes [BR:
hpv01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.14 glycolate dehydrogenase
HPV225_0504 (glcD)
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Gene cluster
GFIT
Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
ADI34588
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All DBs
Position
481761..483140
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AA seq
459 aa
AA seq
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MLEKQHIQYFKNLVGGEDFFTDLAHLNAYCYDATKERHLPSGVIFPKNEQEISQILKYCN
EHRIIVVPRGAGSGFTGGALSVSGGLVLSVEKHLDKILEIDTKNLIARVEPGVINKHFQN
EVEKLNLFYPPDPASENQSTLGGNVAENAGGMRAAKYGITKDYVMAMRVVLANGEIIRAG
KKTIKDVAGFNVAGLMIASEGCLGVISEITLKLLAKPPLKQSAMGVFNHIEDAMNAVYKT
MSSGVTPVAMEFLDNLSIKAVEERFSKGLPKDAGAILITQVDGVVKEQIAWQLNEIEKHF
KANGCVGFKIAQNEQEEQDLWFSRRNASQSISVYGKKKLNEDVTVPRASLPSLLQEVAKI
SQKYGFKIPCFGHTGDGNVHVNIMLEDPKRDLEKGHQAMEEIFQAAISLEGTLSGEHGIG
LSKAKFMPLAFNHSEMELFRNIKKALDPNNILNPFKMGL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgttagagaaacaacacatccaatattttaaaaacctagtagggggagaggattttttc
actgatttagcgcatttgaacgcttattgctatgacgctaccaaagaaaggcatttgcct
agcggtgtgattttccctaaaaacgagcaagaaatcagccagatcttaaaatattgcaac
gagcatcgcatcattgttgtgcctaggggggctgggagcggttttaccggtggggcgttg
agcgtgagcggagggctagttttaagcgtggaaaagcatttggataagattttagagatt
gacactaaaaatttaatcgctagagtagagccgggcgtgatcaacaagcatttccaaaac
gaagtggaaaaattgaatctcttctaccccccagatccagcgagtgagaatcaaagcact
ttaggggggaatgtcgctgaaaacgccggtggcatgcgcgcggctaaatacggcatcacg
aaagattatgtcatggcgatgagagtggttttagcgaatggtgaaatcataagggcaggc
aaaaaaacgatcaaagatgtcgccggttttaatgttgcagggctgatgatcgctagtgag
gggtgtttgggcgtgatttctgaaatcactttaaagcttttagccaaaccacccttaaaa
caaagcgcgatgggggtttttaaccatattgaagatgctatgaatgctgtttataagaca
atgagcagtggcgttacgcctgtggcgatggaatttttggataatttgagtatcaaagcg
gttgaagaacgattttctaaaggcttacccaaagacgctggagcgatactcatcactcaa
gtggatggcgtggtaaaagagcagattgcatggcaactcaatgagatagaaaagcatttt
aaagccaatgggtgcgtgggttttaagatcgctcaaaacgaacaagaagagcaggattta
tggttttcaaggcgtaacgcttctcaaagtattagcgtttatggtaaaaagaaattgaat
gaagatgtaaccgttcctagggcgagtttgccgagtttgttgcaagaagtcgctaaaata
agccaaaaatacggctttaaaatcccttgctttgggcatacaggcgatggcaatgtgcat
gtgaatatcatgctagaagatcctaaaagggatttagaaaaagggcatcaggctatggaa
gagatttttcaggccgctatcagtttggaggggactttaagcggggagcatggcataggc
ttgtctaaagccaaattcatgcctttagcgttcaatcatagtgaaatggagctttttagg
aatattaaaaaagcccttgatcccaataatattttaaacccttttaaaatggggttgtaa
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