Helicobacter pylori 2018: hp2018_0897
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Entry
hp2018_0897 CDS
T01914
Symbol
hopB
Name
(GenBank) Outer membrane protein/porin
KO
K15844
outer membrane protein HopB/AlpB
Organism
hpw
Helicobacter pylori 2018
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HP_OMP
Motif
Other DBs
NCBI-ProteinID:
ADZ51601
LinkDB
All DBs
Position
907610..909196
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AA seq
528 aa
AA seq
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MKQNLKPFKMIKENLMTQSQKVRFLAPLSLALSLSFNPVGAEEDGGFMTFGYELGQVVQQ
VKNPGKIKAEELAGLLNSTTTNNTNINIAGTGGNVAGTLGNLFMNQLGNLIDLYPTLNTS
SLHQCGSNGTTASGSTAAATTSNSPCFQGNLSLYNEMVSSIKTLRQNISNNIFQGNNNTT
SANLSNQLSELNTASVYLTYMNSFLNANNQAGGIFQNNTNQAYGNGVTAQQIAYVLKQAS
ITMGPSGDSGAAGAFLDAALAQHVFNSANAGNDLSAKEFTSLVQNIVSNSQNALTLANNA
NISNSTGYQVSYGGNIDQTRSTQLLNNTTNTLAKVTALNNELKANPWLGNFAAGNSSQVN
AFNGFITKIGYKQFFGENKNVGLRYYGFFSYNGAGVGNGPTYNQVNLLTYGVGTDVLYNV
FSRSFGSRSLNAGFFGGIQLAGDTYISTLRNSPQLASRPTATKFQFLFDVGLRMNFGILK
KDLKSHNQHSIEIGVQIPTIYNTYYKAGGAEVKYFRPYSVYWVYGYAF
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaaatttaaagccattcaaaatgattaaggaaaatttaatgacacaatctcaa
aaagtaagattcttagcccctttgagcctagcgttaagcttgagcttcaatccagtgggc
gctgaagaagatgggggctttatgacctttgggtatgaattaggtcaggtggtccaacaa
gtgaaaaacccgggtaaaatcaaagccgaagaattagcaggcctgttaaactctaccacg
acaaacaacaccaatatcaatattgcaggcacaggaggcaatgtcgccgggactttaggc
aacctctttatgaaccaattgggcaacttgattgatttgtatcctactttgaacactagt
agtcttcaccaatgtggtagtaacggcacaaccgctagtggttctactgctgccgctact
actagcaatagcccttgtttccaaggcaacctgtctctttataacgaaatggttagctct
atcaaaactttgagacaaaacatcagcaacaatatattccaaggcaacaacaacaccacg
agcgctaatctctccaaccagctcagtgagttgaacaccgctagcgtttatttgacttac
atgaactcattcttaaacgccaacaaccaagcgggtgggatctttcaaaataacaccaat
caagcttatgggaatggtgttaccgcccaacaaatcgcttatgtcttaaagcaagcttca
atcaccatggggccaagcggtgatagcggggctgcgggagcgtttttagacgccgcttta
gcccaacatgtcttcaactcggctaacgctgggaacgatttgagcgctaaggaattcact
agcttggtgcaaaacatcgtcagtaactctcaaaacgctttaacgctagccaacaacgct
aacatcagcaattcaacaggctatcaagtgagctatggcgggaatattgatcaaacgcgc
tctacccagctattaaacaacaccacaaacactttggctaaagttaccgctttgaataac
gagcttaaagctaacccatggcttgggaatttcgctgccggtaacagctctcaagtgaat
gcgtttaacgggtttatcactaaaatcggttataagcaattctttggggaaaacaagaat
gtgggcttacgctactatgggttcttcagctataacggcgcgggcgtgggtaatggccct
acttacaatcaagtcaatctgctcacttatggggtggggactgatgtgctttacaatgtg
tttagccgttcttttggcagtaggagtcttaacgcgggcttctttggggggatccaactc
gcaggggacacttacatcagcacgctaagaaacagccctcaacttgcgagcagacctaca
gcgacaaaattccaattcttgtttgatgtgggcttacgcatgaactttggtatcttgaaa
aaagacttgaaaagccataaccagcattctatagaaatcggtgtgcaaatccctacgatt
tacaacacttactataaagctggcggtgctgaagtgaaatacttccgtccttatagcgtg
tattgggtctatggctacgccttctaa
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