Helicobacter pylori oki102: HPOKI102_04770
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Entry
HPOKI102_04770 CDS
T03182
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hpyb
Helicobacter pylori oki102
Pathway
hpyb03420
Nucleotide excision repair
hpyb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpyb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HPOKI102_04770
03430 Mismatch repair
HPOKI102_04770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpyb03400
]
HPOKI102_04770
Enzymes [BR:
hpyb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPOKI102_04770
DNA repair and recombination proteins [BR:
hpyb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPOKI102_04770
MMR (mismatch excision repair)
Other MMR factors
HPOKI102_04770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
AAA_12
Viral_helicase1
AAA_30
ResIII
DGKD_4H
DEAD
Motif
Other DBs
NCBI-ProteinID:
AHN34893
LinkDB
All DBs
Position
965453..967483
Genome browser
AA seq
676 aa
AA seq
DB search
MLETLQLNPEQLKAAKALKGYNLVIASAGTGKTSTIVGRILYLLDNGIKPEEILLLTFTN
KASNEMIARVAKYSKSSSKIEAGTFHAVAYRYLKEHYPNLSLKQPKELKKLLESIVDTKN
ALTDDDKKPYTSQHLYALYSLYTNALKQEDFSAWLSNKNPEHTPYATFYENILDEFENTK
KKHNYIDYNDLLLLFKQAMLERPSPYKEVLCDEFQDTNPLQESILDAINPPSLFCVGDYD
QSIYAFNGADISIISNFTQKYKNAQVFTLTKNYRSSKEILDLANQVIQRNERIYPKNLEV
VKSGHFNKPTLLNYNDNIAQCQDIAKRIVMRKNFKEVAVIFRNNASADQLEAALRSHNVP
SKRKGSASFFESKEVALALDICTLIFNPKDIMAAIHVLSHISDIGSNTAKDIHEALMLLG
NGDLKLALTHPNKEAKIYTKKKEITSMGLFEEIFALENSSRFNSVIDKAFHSHPVLMHPK
ISLNGAKMLSDFFTLYTKAPTHSPSALIKHILESAFFQTFKTRLLKERSKNKDGSYNEFK
KLQAQKRFNEKMDLLSSLAKNYQNLGRFLNGTLIGSSEATQGEGVNLLSVHASKGLEFKD
VYIIDLMEGRFPNHKLMNTGGGIEEERRLFYVAITRAKENLWLSYAKNELRENAKPKEHK
PSVFLYEAGLLKPDLK
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
ttgttagaaactttgcaattaaaccctgagcaactcaaagcggccaaggctttgaaaggg
tataatttagtgattgcgagcgctggcacaggaaagacttctacgattgtggggcgcatt
ttatacctgcttgataacggcatcaagcctgaagaaatcttgcttttgactttcaccaat
aaagcgagtaatgaaatgatcgctagggtggctaaatattccaaatcaagttccaaaatt
gaagcaggcactttccatgcggtggcgtatcgctatttaaaagagcattaccccaattta
agcctaaagcaacctaaagaattaaaaaaacttttagaaagcattgtggataccaaaaac
gcgctaacagatgacgataaaaagccctacacttcacagcacctctacgccctctattct
ctttataccaacgctctaaaacaagaagattttagcgcatggctttctaataaaaaccct
gaacacacgccatacgccaccttttatgaaaacattttagacgaatttgaaaacaccaaa
aaaaagcataattatattgattataacgacttactgctactatttaaacaagcgatgcta
gaaagacctagcccttataaagaagtgctttgcgatgagtttcaagacactaacccctta
caagaatccattttagacgctatcaaccctcccagtttgttttgcgtgggcgattacgat
cagagcatttacgcttttaatggggcggatatttctatcatttctaatttcactcaaaaa
tacaaaaacgcccaggttttcacgctcactaaaaactaccgctcttctaaagagatttta
gatctcgctaatcaagtgatacagcgcaatgagcgcatttaccctaaaaatttagaagtg
gtgaaatcagggcatttcaataagcctacgcttttaaattacaacgacaatatcgcgcaa
tgccaagacatcgctaaacgcattgtcatgcgaaagaattttaaagaagtggcagtgatt
tttaggaataacgcgagcgcggatcaattagaagccgctttaagatcccacaatgtgcca
agcaaaagaaaagggagcgcgagcttttttgaatccaaagaagtagcgttagcgttagat
atttgcacgctcatctttaaccctaaagacattatggcagcaatccatgttttaagccat
atcagcgatattggctctaacaccgctaaagacattcatgaagctttgatgcttttaggc
aatggtgatctcaaactagccctaacccaccctaataaagaagccaaaatctacaccaag
aaaaaagaaatcacctctatggggctttttgaagaaatttttgccctagaaaacagctca
aggtttaacagcgtgatagataaagcgttccattcgcacccggtgttgatgcaccctaaa
atctcactcaatggggctaaaatgcttagcgattttttcactctttataccaaagcccct
acccattcccctagcgctttaatcaaacacatcctggaaagcgcgttttttcaaaccttt
aaaacacgccttttaaaagagcgctccaaaaataaggacggctcttataacgagtttaaa
aaactccaagcgcaaaaacgcttcaatgaaaaaatggacttgctgagttctttggcgaaa
aattaccaaaatttagggcgttttttaaacggcactttaataggctctagtgaagccacg
caaggcgagggcgtgaatctattgagcgtgcatgcttctaaaggtttagaatttaaagat
gtttatattatagatttaatggagggccgtttccctaaccacaagctcatgaataccggt
gggggcattgaagaagagcggcggcttttttatgtcgctatcacaagagctaaggaaaat
ttatggctttcttatgcgaaaaacgaattgagagaaaacgccaaacctaaagagcataag
ccctcggtgtttttgtatgaagcggggcttttgaaacctgatttaaaataa
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