Helicobacter pylori oki112: HPOKI112_07130
Help
Entry
HPOKI112_07130 CDS
T03723
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hpyc
Helicobacter pylori oki112
Pathway
hpyc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hpyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPOKI112_07130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpyc03400
]
HPOKI112_07130
Enzymes [BR:
hpyc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HPOKI112_07130
DNA repair and recombination proteins [BR:
hpyc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HPOKI112_07130
Prokaryotic type
HPOKI112_07130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AHN36773
LinkDB
All DBs
Position
complement(1428226..1428927)
Genome browser
AA seq
233 aa
AA seq
DB search
MKLFDYAPLSLAWREFLQSEFKKPYFLEIEKRYLEALKSPKTIFPKSSNLFYALNLTPPS
AVKIILLGQDPYHSTYLENQQELPVAMGLSFSVEKNAPIPPSLKNIFKELHANLGVPVPC
CGDLSAWAKRGMLLLNAILSVEKNQAASHKRIGWEAFSDQILMRLFEANAPLIVVLLGKI
AQKKIALIPKNKHIVITAPHPSPLSRGFLGSGVFTSIQNAHRKIYHKDFDFSL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttttgactacgctcctttaagcttggcttggcgggagtttttacaaagcgaa
tttaaaaagccttattttttagaaatagaaaaacgctacttagaagctctaaaaagccct
aaaaccattttccctaaaagctctaatctgttttacgcgctcaatctaacgcctcctagt
gcggttaaaatcatccttttagggcaagatccctaccattccacctacctagaaaaccaa
caagaattgcctgtggcgatgggcttaagctttagcgtggaaaaaaacgcccccatcccc
ccaagcttaaaaaatatttttaaagaattgcatgcgaatttaggcgtgcctgtgccttgt
tgtggggatttgagcgcgtgggctaaaaggggcatgctgttattgaacgccattttaagc
gtggaaaaaaaccaagccgcttcgcacaaacgcatcggctgggaagcttttagcgatcaa
atattgatgcgcctttttgaagccaacgcccccttgatcgtggtgctattaggaaagatc
gcccaaaaaaagatcgctctgatccccaaaaacaaacacattgtcattaccgctcctcac
cctagcccattatctagggggtttttagggagtggggtttttacaagcatccaaaacgcc
cacagaaagatttaccataaggattttgattttagtttatga
DBGET
integrated database retrieval system
