KEGG   Helicobacter pylori oki154: HPOKI154_04190
Entry
HPOKI154_04190    CDS       T03725                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
hpye  Helicobacter pylori oki154
Pathway
hpye03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hpye00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    HPOKI154_04190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hpye03400]
    HPOKI154_04190
DNA repair and recombination proteins [BR:hpye03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HPOKI154_04190
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG UVR HHH_5 HHH_2
Other DBs
NCBI-ProteinID: AHN39131
LinkDB
Position
835661..837445
AA seq 594 aa
MADLLSSLKNLSHSSGVYQYFDKNRQLLYIGKAKNLKKRIKSYFSVRNNEITPNYRASLR
IQMMVKQIAFLETILVENEQDALILENSLIKQLKPKYNILLRDDKTYPYIYMDFSTDFPI
PLITRKILKQPGVKYFGPFTSGAKDILDSLYELLPLVQKKNCIKDKKACMFYQIERCKAP
CENKITKEEYLKIAKECLEMIENKDKLIKELELKMERLSNNLRFEEALIYRDRIAKIQKI
APFTCMDLAKLYDLDIFAFYSGSHKAVLVKMFMRGGKIISSAFEKIHSLNGFDTDEAMKQ
AIINHYQSHLPLMPEQILLNACSNETLKELQDFISHQYSKKIALSIPKKGDKLALIEIAM
KNAQEIFSQEKTSNEDLILEEARSLFKLECMPYRVEIFDTSHHANSQCVGGMVVYENHEF
QKNSYRRYHLKGSNEYTQMSELLTRRALDFAKEPPPNLWVIDGGRAQLNIALEILKSSGS
FVEVIAISKEKRNSKAYRSKGGAKDIIHTASDTFKLLPSDKRLQWVQKLRDESHRYAINF
HRSTKLKNMKQIALLKEKGIGEASVKKLLDYFGSFEAIEKASEQEKNAVLKKRI
NT seq 1785 nt   +upstreamnt  +downstreamnt
atggctgatttattatccagtttgaaaaacctttctcatagcagtggcgtgtatcaatat
tttgataaaaaccgccaattactctatatcggtaaggcgaaaaatttaaaaaaacgcatc
aaaagctatttttctgtccgcaataatgaaatcacgcccaattatcgcgcaagcttacgc
atccaaatgatggtcaaacagatcgcttttttagaaaccattttagtagaaaacgagcaa
gacgctttgattttagaaaattctttaatcaagcagctcaagcccaaatacaacattctt
ttaagagacgataaaacttacccttatatttatatggatttttccactgatttccctatc
cctttaatcacacgaaaaattttaaaacagcctggcgttaaatattttggcccttttacg
agcggggctaaagatattttagacagcttgtatgaattgctcccgttagttcaaaagaaa
aattgcatcaaagataaaaaggcatgcatgttttatcaaatagagcgttgtaaagcccca
tgcgagaataaaatcaccaaagaagagtatttgaaaatcgctaaagaatgtttagaaatg
attgaaaataaagacaaactcatcaaagagcttgaattaaaaatggagcgcctttctaat
aacttgcgttttgaagaagccctcatttatagggataggattgcaaaaatccaaaaaatc
gcccctttcacttgcatggatttagccaaactctatgatttggatatttttgctttttat
agtgggagccataaggcggtgttggtgaaaatgtttatgcgtgggggtaaaatcatttct
tcagcgtttgaaaaaatccactctctcaatgggtttgacactgatgaagcgatgaagcaa
gccattatcaatcattaccaatcgcatttgcctttgatgcctgaacagattttattgaac
gcttgctctaatgaaacgcttaaagaattgcaagattttatctctcaccaatactctaaa
aaaatcgctcttagtattcctaaaaaaggcgataagctcgctttaatagaaatcgctatg
aaaaacgctcaagagatttttagccaggaaaaaacctctaatgaagatctgattttagaa
gaagcgcgatcgctctttaaattagagtgcatgccttatagggtggaaatttttgacaca
agccaccatgccaacagccaatgcgtggggggaatggtcgtgtatgaaaatcatgaattt
caaaaaaactcctatcggcgctaccatttaaaaggctctaatgaatacactcaaatgagc
gaattgctcaccagaagggctttagatttcgccaaagagccgccgcctaatttgtgggtg
atcgatggagggagggcgcaattaaacattgctttagaaattttaaaaagcagcgggagt
tttgtagaagtgatcgctatttctaaagaaaaaaggaattctaaagcttatcgctctaaa
gggggcgctaaagacattatccacaccgctagcgatacttttaaattgctccctagcgac
aagcgcttgcaatgggtgcaaaaattgcgcgatgaaagccaccggtatgcgataaacttc
catagatccactaaactcaaaaacatgaaacaaatcgctcttttaaaagaaaagggtata
ggagaagccagcgtgaaaaaattgttggattattttgggagttttgaagcgatagaaaaa
gcgagcgagcaagaaaaaaacgctgttttaaaaaaacgaatctaa

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