Helicobacter pylori oki422: HPOKI422_02905
Help
Entry
HPOKI422_02905 CDS
T03726
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
hpyf
Helicobacter pylori oki422
Pathway
hpyf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hpyf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HPOKI422_02905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpyf03400
]
HPOKI422_02905
DNA repair and recombination proteins [BR:
hpyf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPOKI422_02905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
UVR
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AHN40344
LinkDB
All DBs
Position
complement(575764..577548)
Genome browser
AA seq
594 aa
AA seq
DB search
MADLLSSLKNLPNSSGVYQYFDKNRQLLYIGKAKNLKKRIKSYFSICNNEITPNHRASLR
IQMMVKQIAFLETILVENEQDALILENSLIKQLKPKYNILLRDDKTYPYIYMDFSTDFPI
PLITRKILKQPGVKYFGPFTSGAKDILDSLYELLPLVQKKNCIKDKKACMFYQIERCKAP
CENKITKEEYLKIAKECLEMIENKDRLIKELELKMERLSNNLRFEEALIYRDRIAKIQKI
APFTCMDLAKLYDLDIFAFYGASNKAVLVKMFMRGGKIISSAFEKIHSLNGFDTDEAMKQ
AIINHYQSHLPLMPEQILLNACSNEALKELQEFISHQYSKKIALSIPKKGDKLALIEIAM
KNAQEIFSQEKTSNEDLILEEARSLFNLECVPYRVEIFDTSHHSNSQCVGGMVVYENNAF
QKNSYRRYHLKGSNEYTQMSELLTRRALDFAKEPPPNLWVIDGGRAQLNIALEILKSSGS
FVEVIAISKEKRDSKAYRSKGGAKDIIHTPSDTFKLLPSDKRLQWVQKLRDESHRYAINF
HRSTKLKNMKQIALLKEKGIGEASVKKLLDYFGSFEAIEKASDQEKNAVLKKRI
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttattgtccagtttgaaaaaccttcctaatagcagtggcgtgtatcaatat
tttgataaaaaccgccaattgctctatatcggtaaagcgaaaaatttaaaaaagcgcatc
aaaagctatttttctatctgcaataatgaaatcacgcccaaccatcgcgcaagcttacga
atccaaatgatggtcaaacaaatcgcttttttagaaacgattttagtggaaaacgagcaa
gacgctttgattttggaaaattctttaatcaagcagctcaagcctaaatacaatattctt
ttaagagatgataaaacttacccttatatttacatggatttttccactgatttccctatc
cctttaatcacacgaaaaattttaaaacagcctggcgttaaatattttggcccttttacg
agcggggctaaggatattttggacagcttgtatgagttgctccctttagttcaaaagaaa
aattgcatcaaggataaaaaggcatgcatgttttatcaaatagagcgttgcaaagcccca
tgcgagaataaaatcaccaaagaagagtatttaaaaatcgctaaagaatgtttagaaatg
attgaaaataaagacaggctcatcaaagagcttgaattgaaaatggagcgcctttccaat
aacttgcgttttgaagaagccctaatttacagggacaggattgcaaaaatccaaaaaatc
gcccctttcacttgcatggatttagccaaactctatgatttggacatttttgctttttat
ggcgcgagcaataaggcggtgttagtgaaaatgtttatgcgtgggggtaaaatcatttct
tcagcgtttgaaaaaatccactcccttaatgggtttgacactgatgaggcgatgaaacaa
gccattatcaaccattaccaatcgcatttgcctttgatgcctgaacaaattctattaaac
gcttgttctaatgaagcgcttaaagaattgcaagagtttatctctcatcaatactctaaa
aaaatcgctcttagcattcctaaaaagggcgataagctcgctttaatagaaatcgctatg
aaaaacgctcaagagatttttagccaagaaaaaacctctaatgaagatctgattttagaa
gaagcgcgatcgcttttcaatttagagtgcgtgccttatagggtggaaatctttgacaca
agccaccattcaaacagccaatgcgtggggggaatggtcgtgtatgaaaacaatgcattc
caaaaaaactcttaccggcgctaccatttaaaaggctctaacgaatacactcaaatgagc
gaattgctcaccagaagagctttagactttgccaaagagccaccgcctaatttgtgggta
atagatggagggagggcgcaattaaacatcgctttagaaattttaaaaagcagcgggagt
tttgtagaagtgatcgctatttctaaagaaaaaagggattctaaggcttatcgctctaaa
gggggcgctaaagacattatccatacgcctagcgatacttttaaattgctccctagcgac
aaacgcttgcagtgggtgcaaaaattgcgcgatgaaagccaccggtatgcgataaacttc
catagatccactaaacttaaaaacatgaaacaaatcgctcttttaaaagaaaagggtata
ggagaagccagcgtgaaaaaattattggattattttgggagttttgaagcgatagaaaaa
gcgagcgatcaggaaaaaaacgccgttttaaaaaaacgaatctaa
DBGET
integrated database retrieval system