Helicobacter pylori Aklavik86: HPAKL86_01960
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Entry
HPAKL86_01960 CDS
T02353
Name
(GenBank) hypothetical protein
KO
K23083
3-deoxy-D-manno-octulosonic acid-hydrolase
Organism
hpyk
Helicobacter pylori Aklavik86
Pathway
hpyk00540
Lipopolysaccharide biosynthesis
hpyk01100
Metabolic pathways
Module
hpyk_M00867
KDO2-lipid A modification pathway
Brite
KEGG Orthology (KO) [BR:
hpyk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HPAKL86_01960
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hpyk01005
]
HPAKL86_01960
Lipopolysaccharide biosynthesis proteins [BR:
hpyk01005
]
Lipid A
HPAKL86_01960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BNR_2
DUF3741
Motif
Other DBs
NCBI-ProteinID:
AFX89409
UniProt:
K7Y1G5
LinkDB
All DBs
Position
complement(384039..385157)
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AA seq
372 aa
AA seq
DB search
MEHSRNRLKHAAFFVGLFIVLFLIIMKRQTPPYAFLHNQTLSTKSPPYFTQLTIPKPDDA
LSVHASALISLPNDNLLSAYFSGTKEGARDVKISANLFDGKINRWSEAFIILTKEELSYY
SHEYIKKLGNPLLFLHGDKILLFVVGVSMGGWATSKIYQLESALEPIHFKFVRKLSLSPF
LNLSHLIKNKPLNTTDGGFMLPLYHELATQYPLLLKFDKHNNPRELLRPNALNHQLQPSL
TPFKDCAVMAFRNHSFKDSLMLETCKTPTAWQKPILTNLKNLNDALNLINLNQELYLIHN
PSDLSMRRKELLLSKLENSNSFRTLKILDKANEVSYPSYSFNSHFIDIVYTYNRSHIKHI
RFNMAYLKSLLK
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
ttggaacattcaagaaatcgcctaaagcatgccgccttttttgtggggctttttatcgtt
ttatttttaattataatgaagcgccaaacccccccctatgcttttttgcacaatcaaacc
ctttcaaccaaaagccccccctatttcacacaactcactatccctaaaccagatgacgct
ttaagcgtgcatgcgagcgctttaatcagcttgcctaacgataaccttttgagcgcttat
tttagcggcactaaagaaggggcaagggatgtgaaaatcagcgcaaatctctttgatggt
aagatcaatcgctggagtgaagccttcatcattttaaccaaagaagagctttcttattat
tcgcatgaatatatcaaaaaactaggtaaccccttgctttttttgcatggcgataaaatt
ttgttgtttgtcgtaggggtgagcatgggcgggtgggccacttctaaaatctatcaactt
gaaagcgctttagagccgattcactttaaatttgtgcgaaaactctctttaagccctttt
ttaaacttaagccatttgataaaaaataagcctttaaacaccaccgatggcgggtttatg
ctaccgctttatcacgaattagccacccaataccccttattattgaaatttgacaaacac
aataatccaagagaacttttaaggcctaatgccctaaaccaccagctccagccaagccta
accccctttaaagactgcgctgtcatggcgtttagaaaccattcttttaaagatagcctc
atgctagaaacctgtaaaacccccaccgcttggcaaaaacccatacttacgaatttgaaa
aacttgaatgacgctttgaatttgatcaatttaaaccaagaattgtatttgatccacaac
cctagcgatttatcaatgcgccgtaaagaactcttgctttctaaattagaaaactcaaac
tcttttagaaccttaaaaattttagataaagccaatgaagtgagttacccaagttatagt
tttaattctcattttatagatattgtctatacctacaaccgctctcatatcaaacacatc
cgttttaatatggcttatttaaaatcccttctcaagtga
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