Helicobacter pylori SouthAfrica20: HPSA20_0726
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Entry
HPSA20_0726 CDS
T02807
Name
(GenBank) hypothetical protein
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
hpys
Helicobacter pylori SouthAfrica20
Pathway
hpys00540
Lipopolysaccharide biosynthesis
hpys01100
Metabolic pathways
Module
hpys_M00867
KDO2-lipid A modification pathway
Brite
KEGG Orthology (KO) [BR:
hpys00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HPSA20_0726
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hpys01005
]
HPSA20_0726
Lipopolysaccharide biosynthesis proteins [BR:
hpys01005
]
Lipid A
HPSA20_0726
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Gene cluster
GFIT
Motif
Pfam:
LpxR
Motif
Other DBs
NCBI-ProteinID:
AGT73963
UniProt:
T1UC11
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Position
680673..681683
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AA seq
336 aa
AA seq
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MFFKFILCLSLGIFAWAKEIIPTPSTPLTPSKRYSINLMTENDGYINPYIDEYYTAGNQI
GFSTKEFDFSKNKAMKWSSYLGFFNKSPRVTRFGISLAQDMYTPSLANRKLVHLHDNHPY
GGYLRVNLNVYNRHQTFMELFTISLGTTGQDSLAAQTQRLIHKWGHDPQFYGWNTQLKNE
FIFELHYQLLKKVPLLKTRFFSMELMPGFNVELGNARDYFQLGSLFRAGYNLDADYGVNK
VNTAFDGGMPYSDKFSIYFFAGAFGRFQPLNIFIQGNSPETRGIANLEYFVYASEIGAAM
MWRSFRVAFTITDISKTFQSQPKHHQIGTLELNFAF
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
ttgtttttcaaatttattttatgtttatcattaggaatatttgcatgggcaaaggaaatc
attccaaccccttcaaccccattaacgccctctaaacgctattctatcaatttgatgact
gaaaatgatggttatatcaatccttacattgatgagtattacacggcaggcaatcaaata
ggcttttctactaaagagtttgacttttctaaaaataaagcgatgaaatggtcttcgtat
ttagggtttttcaataaaagccctagggttactcgttttggcatttctctcgcccaagac
atgtacaccccctcacttgcaaacagaaaactggtgcatttgcatgacaaccacccttat
ggggggtatttacgggtgaatttgaacgtgtataaccgccatcaaactttcatggagtta
ttcacgatttctttaggcacgacagggcaagattctttggccgctcaaacacagcgtctc
attcataaatggggtcatgatccccaattttatggctggaacacgcagctcaaaaacgaa
tttatctttgaattgcactaccaattgctcaaaaaagtccctcttttaaagactcgtttt
ttttctatggagttgatgcctgggtttaatgtggaactggggaatgcgagggattatttc
caactcggctcgctctttagggctgggtataacttggacgctgattatggggtcaataag
gtcaataccgcttttgatgggggcatgccttatagcgataagttttccatctattttttt
gcaggggcttttgggcgcttccaaccccttaacatcttcattcaaggcaacagccctgaa
actaggggcattgccaatttggaatactttgtttatgccagtgaaataggagcggctatg
atgtggcgcagctttagggtggcttttacgatcactgatattagtaaaacctttcagtcc
cagcctaagcaccatcaaatcggcactttagaattgaatttcgccttttga
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