KEGG   Helicobacter pylori SouthAfrica20: HPSA20_0802
Entry
HPSA20_0802       CDS       T02807                                 
Name
(GenBank) hypothetical protein
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
hpys  Helicobacter pylori SouthAfrica20
Pathway
hpys03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hpys00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HPSA20_0802
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hpys03019]
    HPSA20_0802
Messenger RNA biogenesis [BR:hpys03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HPSA20_0802
SSDB
Motif
Pfam: HD RNase_Y_N KH_1 HDOD KH_KhpA-B KH_NusA_2nd
Other DBs
NCBI-ProteinID: AGT74038
UniProt: T1UC73
LinkDB
Position
complement(750221..751732)
AA seq 503 aa
MKKIYYARGQTILKSASAKAKLMEFQAKSFVDAEEMRMKSQECKLQQQYENKNLQLQTHF
DKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQRAICKEAQSKA
LDAMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGRKKSYAILAEATAR
FAGDYATENLTTRIALPCSDYIGRVIGKDGKNIEAFKKISGVDIEFSEDSNELCLSSFNL
YRREVASETIKILIEDGRIQPNRIEEVYNRVVRNMEKELLSEGESVVLELELGAMEDELK
ILLGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLARRAGILHDIGKALTQELGR
DHVNLGVEVCKRNREYPVVINAIYAHHGHEEIMSVECASVCAADALSAGRPGARRKSDEE
YAKRMQALEEIALGFEGVEKAYAMESGRELRVIVKSNQVRDNQVPIIARKIAKKIEESAQ
YVGEVGVQVVRENRFKTTATLKQ
NT seq 1512 nt   +upstreamnt  +downstreamnt
atgaaaaagatctattatgctagagggcaaaccattttaaaaagcgcttccgccaaagct
aagctaatggaatttcaagcgaaatctttcgtggatgctgaagagatgcgcatgaaaagc
caagaatgcaaattgcaacagcaatatgaaaataagaatttgcaactccaaacccatttt
gacaaaaaagaagcgcatttgaagcatttagaagcgcaacacaaagaatttgtaagagat
gaaaaacgctatttggaaaaggaaaaaaaagagcttgaaaaagagcgccaaattttagaa
caagaaaaagaaaattttaaaaaacagcgcgctatttgcaaagaagctcaatccaaggcg
ctagatgcgatgctcaattacatggcttacactaaagatgaaattaaaagcatgatttta
gagcaattagaagaagaattagaagcgcaaaaaagcgcgttaatcaggcgttatgaaaaa
gaagccaaagaagagggtaggaaaaaatcgtatgcaattttagcggaagcgacagcccgt
tttgcgggcgattacgcgacagagaatttaacaacccgtatcgctttgccatgctcagat
tatattggccgtgtgataggcaaagatgggaaaaacattgaagcgtttaaaaagatcagt
ggggtggatatagaatttagcgaagatagtaacgaattgtgtttgtctagtttcaatctt
tatcggcgtgaagtggcgagcgaaacgattaaaattctaatagaagacggccgtatccag
cctaataggattgaagaggtttataatagagttgtgcgtaacatggaaaaagaattgctt
tctgagggagagagcgtggtgttagaattggagcttggggctatggaagatgagcttaaa
atcttgctgggtaaaatgcgttatcgttctagttttgggcaaaacgctttacagcattct
aaagaagtcgcccttttagccggcttgattgcagagcagcttggaggggataaaaagctc
gctagaagggccggtattttgcatgatattggtaaagcgctcactcaagagcttgggaga
gaccatgtgaatttaggggttgaggtgtgcaagcgcaatagagaatatccggtcgttatc
aatgcaatctatgcccaccatgggcatgaagaaatcatgagcgtggagtgcgcgagcgtg
tgtgcggctgatgcgctttctgcggggcgtcctggcgcaagaagaaagagcgatgaagaa
tacgctaaacgcatgcaggctttagaagagatcgcactagggtttgaaggggttgaaaag
gcgtatgcgatggagagcgggcgagaattaagagtgattgtcaaatccaatcaagttagg
gataatcaagtgccaatcattgcaagaaagatcgccaaaaagatagaagagagcgctcaa
tatgtgggcgaagtgggcgtgcaagtggtgcgagaaaatcgtttcaaaaccacagccacg
ctcaagcaataa

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