KEGG   Herbaspirillum rubrisubalbicans: Hrubri_2051
Entry
Hrubri_2051       CDS       T04238                                 
Symbol
def
Name
(GenBank) N-formylmethionyl-tRNA deformylase/polypeptide deformylase protein
  KO
K01462  peptide deformylase [EC:3.5.1.88]
Organism
hrb  Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:hrb00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    Hrubri_2051 (def)
Enzymes [BR:hrb01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.88  peptide deformylase
     Hrubri_2051 (def)
SSDB
Motif
Pfam: Pep_deformylase
Other DBs
NCBI-ProteinID: ALU89242
LinkDB
Position
2349208..2349744
AA seq 178 aa
MAIREILKMGDPRLLRQAQPVTDFGTPELARLVDDMFQTMRAVNGAGLAAPQIGVDLQLV
IFGFGHNQRYPDAPAVPETVLINPVLTPLSEEEEEGWEGCLSVPGMRGVVPRWRQLRYQG
FDQNGHPIDRTVDGFHARVVQHECDHLQGILYPMRIRDFRQFGFTEILFPDLDPSQDD
NT seq 537 nt   +upstreamnt  +downstreamnt
atggcaatacgcgaaattctcaagatgggcgacccgcgcctgctgcgccaggcgcagccg
gtgacggactttggtacgcccgaactggcgcggctggtggatgatatgttccagaccatg
cgtgcggtcaatggggctggtcttgccgcgccgcagatcggggtggacctgcaactggtg
atcttcggcttcggccacaaccagcgctaccccgatgccccggccgtgccggagacggtg
ctcatcaatccggtattgacccccttgtcggaggaagaggaagagggctgggaaggctgc
ctgtcagtcccggggatgcgtggcgtggtgccgcgctggcgccagttgcgctaccagggc
ttcgaccagaacggtcatcccatcgatcgtaccgtggatggcttccatgcccgggtggtg
cagcatgagtgcgatcacttgcagggcatcctgtatccgatgcgcatccgcgatttccgg
caattcggctttaccgaaatcctgttcccggacctcgatcccagtcaggacgactga

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