Herbaspirillum rubrisubalbicans: Hrubri_3657
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Entry
Hrubri_3657 CDS
T04238
Symbol
rpsA
Name
(GenBank) 30s ribosomal subunit S1 protein
KO
K02945
small subunit ribosomal protein S1
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Hrubri_3657 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
hrb03011
]
Hrubri_3657 (rpsA)
Ribosome [BR:
hrb03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Hrubri_3657 (rpsA)
Bacteria
Hrubri_3657 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
S1_2
Motif
Other DBs
NCBI-ProteinID:
ALU90814
UniProt:
A0A0U3K3R7
LinkDB
All DBs
Position
complement(4304469..4306226)
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AA seq
585 aa
AA seq
DB search
MHHTDTGQSFLLSFMSTTTVIAAGVDTSSEFAALFEESLSRQDMRSGEVISAEVVRLDHN
FVIVNAGLKSEAFIPVEEFKNDNGEVEVNVGDFISVAIESLENGFGDTILSRDKAKRLAS
WLSLEKAMESGEIVTGTVNGKVKGGLTVLTNGIRAFLPGSLVDTRPVKDTTPFEGKTLEF
KVIKLDRKRNNVVLSRRAVIEASMGEERAKLMETLKEGTVVTGVVKNITDYGAFVDLGGI
DGLLHITDLAWRRVRHPSEVLSVGQEITAKVLKYDQEKNRVSLGVKQLGDDPWTGLSRRY
PQGTRLFGKVTNLTDYGAFVEVEQGIEGLVHVSEMDWTNKNVAPNKVVQLGDEVEVMVLE
IDEERRRISLGMKQCKPNPWDDFAMSHKKGDKVKGSIKSITDFGVFIGLPGNIDGLVHLS
DLSWTEAGEEAVRKFKKGDELEAVVLAIDVERERVSLGVKQLEGDPFNNFAALNDKGAIV
TGTVKSVEPKGAVIQLTDEVEGYLRASEISRDRVEDAGTHLKVGDSVEALVINIDRKARS
IQLSIKAKDNAETQEAMQKMSADSNAASGTTSLGALLKAKLDNKN
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
ttgcatcacacggataccggccaatctttcttactttcttttatgtctaccactaccgtt
atcgctgcaggtgttgatacctccagcgaatttgctgctctgttcgaagaatcgctgtcg
cgtcaggacatgcgttcgggtgaagtcatctcggcagaagtcgtgcgcctggatcacaac
ttcgtgatcgtcaacgccggcctgaagtccgaagccttcatccctgttgaagaattcaag
aacgacaacggcgaagtcgaagtcaacgtcggcgacttcatctccgttgcgatcgaatcc
ctggaaaacggtttcggcgacaccatcctgtcgcgcgacaaggccaagcgtctggcatcg
tggctctcgctggaaaaggcgatggagtccggcgagatcgtcaccggtaccgtcaatggc
aaggtcaagggcggcctgaccgtgctgaccaacggcatccgtgccttcctgccgggttcg
ctggtcgacacccgtccggtcaaggacaccaccccgttcgaaggcaagaccctggaattc
aaggtcatcaagctggaccgcaagcgcaacaacgtggtgctgtcgcgccgcgccgtgatc
gaagcctcgatgggcgaagagcgcgccaagctgatggaaaccctgaaggaaggcaccgtc
gtcaccggtgtcgtcaagaacatcaccgactacggtgcgttcgttgacctgggtggcatc
gacggcctgctgcacatcaccgatctggcatggcgtcgcgtgcgtcacccgtcggaagtg
ctgtcggttggccaagagattaccgccaaggtcttgaagtacgatcaagagaagaaccgc
gtctccctgggcgtgaagcaactgggcgacgatccgtggaccggtctgtcgcgtcgctac
ccgcaaggcacccgcctgttcggcaaggtcaccaacctgaccgactacggtgcattcgtg
gaagtcgaacaaggcatcgaaggcctggtgcacgtctccgaaatggactggaccaacaag
aacgtggccccgaacaaggttgtccagctgggcgacgaagtcgaagtcatggttctggaa
atcgacgaagagcgtcgtcgtatctccctgggcatgaagcagtgcaagccgaacccgtgg
gacgacttcgccatgagccacaagaagggcgacaaggtcaagggttcgatcaagtcgatc
accgacttcggcgtgttcatcggcctgccgggcaacatcgacggcctggtgcacctgtcc
gacctgtcctggaccgaagctggcgaagaagccgtgcgcaagttcaagaagggcgacgag
ctggaagccgttgtgctggccatcgatgtggaacgcgagcgcgtctccctgggcgtgaag
caactggaaggcgacccgttcaacaacttcgctgccctgaacgacaagggtgcgatcgtg
accggtaccgtcaagtcggttgagcccaagggcgccgtgatccagctgaccgacgaagtc
gaaggctacctgcgcgcttccgaaatctcccgcgaccgcgtggaagatgccggtacccac
ctgaaggttggcgactccgtcgaagccctggtcatcaacatcgaccgcaaggcacgcagc
atccagctgtcgatcaaggccaaggacaacgccgagacccaggaagccatgcagaagatg
tcggctgactccaacgctgcttcgggcaccaccagcctgggcgcgctgctgaaggccaag
ctcgacaacaagaactga
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