Haliotis rufescens (red abalone): 124119458
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Entry
124119458 CDS
T07893
Name
(RefSeq) sodium channel protein type 4 subunit alpha B-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hrf04040
]
124119458
Ion channels [BR:
hrf04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
124119458
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
SieB
Motif
Other DBs
NCBI-GeneID:
124119458
NCBI-ProteinID:
XP_046337913
LinkDB
All DBs
Position
Unknown
AA seq
1928 aa
AA seq
DB search
MDEEGVEEYRNFRPFTRDSLFNIERRIAEEQAAKEAHKLKEAGDSDDSEDEIEEPSHHEP
DPKPNSKLEAGRKLPPSLEEGSGRFVGRPIEDLDEYYHNQKTFCVIGRDKTIYRFNATNA
LFVLSPFNPIRRVALYILVHPLFSVVVMLTIIVNCVFMTMTEGPEEYVEQIFTGIYTFEA
STKILARGIILTPFTYLRDPWNWLDFFVISIAYLTMWIKSLGNLSALRTFRVLRALKTVA
VIPGLKTIVGALLEAVRRLRDVMILTVFVLSIFALVGMQLYSGGLRQKCVQNWTIELGPN
ISDIEWLSFVNDSNNWWKVGDDYIVCGNGSGAGGCKENYTCLPDLGDNPNFGYTSFDNFG
WALLCAFRLMTQDYWESLYKLVLRAEGSAHAMYFVLVILLGSFYLVNLILAIVAMSYDEQ
QKQDAADAADEAAERMEEEERREILSQMTKSPSDASFKSDQYNPDKAEDKERVSLTSDQS
GGSHLHPNSKKRGSVSLPGSPFAYRRSSRGSQFSWKKKPSGRATDRQPLVYQTLESLPLP
FADDSAAVTPSSEDLCNFPFHKNAPNGRRYSFASQTRRHWPDARPPSRRSSFASNVSRNS
RTSRYSVHSPLDPLKKESKMDTLFNFTRKGSQRVPDVVVDKPRLDRDNDSVSSLGSECVG
EKQKMSPTNTFLCPSPTAANVDIKDVMVLKDLIDHASGHRRSFMSVVSVQPEAVRDKLMN
YLCLWNCSPNFKKLQYFVSLFIMDAFVDLFITLCIVVNTGFMALDHWDMNEDLKSVSEFA
NTLFTGIFAAEAFLKILALSPINYFKDNWNVFDSFIVFLSLMELMLEELPGLSVLRAFRL
LRVFKLAKSWPTLNMLIAIVGRTMGALGNLTIVLGIVVFIFAVMGQQLFRDSYQRYINDS
DIGGGMPRWNFDDFLHSFMIIFRVLCGEWIESMWGCMRVAGYPCVPFFLLTMVIGNLVVL
NLFLALLLSSFGAESLQRSEADDEPNKLAEAVDRFKRFGAWVKVKIIVCLKVKLRRKTKR
PVIALSPSSSRPELNGKEALADGQTVVGNGKAYELHQTQDTESLSPNKTDAEKGLDLPDG
EKVGETTALLPRRCSEGSVNKDSKSMLGSEASSSSSSLSESEKDIKVEADGEPEINEVDI
VYVKEPDDCLCKVCTRKFKCLATIEESKTGQIWWKFRCFMFRVTEHKYFETFIITMILAS
SSALALEDEYLGERPILKAILMYLDKCFTAIFILEMLVKWVAFGFKTYFTDAWCWLDFII
VSLSIVLLAAESFNLGDLGSIKALRTLRALRPLRAVSRWEGMRVVVNALIKAIPSIFNVL
LVCLVFWLIFGIMGVQLFAGRFHKCVDADGTRLNISVVDHRNQCETQNYTWTNSKINFDN
VMNAYLALFQIATYKGWTDIMNDAIDSRQPNYQPLYEDNRYMYMYFVLFIIFGSFFTLNL
FIGVIIDNFNQQKKKGGSLEMFMTDDQKKYYMAMKRMQSKSPQKSIPKPKLWIAGIIFDV
TTNQMFDIGIMVVILLNMITMMIEHEGMTHEIDEALKYINIVFIAIFTLECVLKIIGLRQ
FYFKIPWNVFDFVVVILSILALSLAGFFENFFVSPTLLRVIRVFRVGRVLRLVKSAKGIR
TLLFSLAVSLPALFNIGLLLALVMFIYAIMGMNFFMKAEEEYGLDDAFNFKTFFRSFILL
FQMCTSAGWDGVLNGLIAKCKPNEPCTQYTIATMYLVTYLVISFLVVVNMYIAVILENFS
QATEDVQQGLTPDDFDMYYEKWEKYDPDATQYIQLDMLSDFVDFLEEPLQLQKPNHFMLV
KLDIPICDGDMCFCRDILDALTKNFLGTTETPDMPTQQEAETEYVVVSSTLKRQKEHYAA
KIIQKAYRTFRRKKHGSEDDDEENDIDEDCVDNGDAETVVVETTSSHASDTTEQQKTVEL
HADSDIVA
NT seq
5787 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagagggcgtcgaggaataccggaacttccgccccttcacccgggactccctc
ttcaatatcgagaggcggatagcggaggaacaggcagcgaaggaggctcacaaactcaag
gaggctggtgactcggatgactctgaggatgagattgaagaaccaagtcaccatgaacca
gaccccaagccaaactccaagctcgaggctgggcgaaagcttcctccgtccctggaggag
gggtctggccggtttgtggggcgacctattgaggatctggacgagtattaccataaccag
aagacgttctgcgttatcgggagggacaagacaatctaccggtttaacgctacaaatgcg
ttgtttgtcctcagccccttcaacccaatcaggagggtcgcactctacattctcgtccat
cctctatttagcgtcgtggtgatgttgacaattatagtcaactgtgtattcatgacgatg
acagaaggccctgaagaatatgtggaacaaatcttcactgggatctatacgtttgaagct
tcgacgaagatcttggcacgagggatcattttaactccatttacgtatctccgtgatccc
tggaactggctagacttttttgttatttctatagcatatttgaccatgtggataaaaagt
ttgggcaatctatcggccttgagaacctttagggtacttcgagctctaaaaacagtagca
gttataccaggattaaaaaccattgtgggtgccttattggaagcggtccggcgtttgcga
gatgtcatgatattgacggtgttcgtcttgtcgatattcgcccttgtcggcatgcagctc
tattcgggtggactgagacagaagtgtgtgcagaattggaccatcgagcttggacccaat
atatcggacatagaatggttgtcatttgtcaatgattcaaacaactggtggaaggtgggt
gacgattatatcgtatgcggaaatggcagtggagccggtggatgtaaggagaactacacg
tgcttacccgacctgggcgacaatccgaattttggctacaccagcttcgacaactttggc
tgggcgttgttgtgtgccttccgcctcatgacacaggactactgggagagtctgtacaag
ctggttctgagagcggaaggttctgctcatgcgatgtactttgttctcgttatattgctg
gggtccttctacctggtcaacctcatcctcgccatcgttgccatgtcgtacgatgaacaa
cagaagcaggacgccgccgacgccgctgatgaggctgccgagagaatggaagaggaagag
agacgagaaattttgtcccagatgaccaagagtccatccgatgcgtccttcaaaagtgac
cagtataatccggacaaggcggaggacaaggaacgggtcagtttaacgtccgaccaatca
ggcggcagtcatctccatccgaactccaagaaacgaggcagtgtaagcctccccggctcg
ccgtttgcgtatcgtcgaagcagtagggggagtcagttcagttggaagaaaaaacccagc
ggccgggcaaccgaccggcaaccccttgtttaccagacattggaaagtcttccccttcct
tttgctgatgattccgcggcagtgacgccatcgtcagaagatctatgcaattttcctttt
cacaagaatgctccaaatggcaggcgatatagtttcgcttcccaaacacggaggcattgg
ccggacgccagacctccatcaagaagaagcagttttgcttccaacgttagtcggaactcc
cgtactagtagatactccgtgcattcccctctggaccctttaaaaaaagagagcaaaatg
gatactttgtttaactttacccgcaaagggagtcaacgtgtccctgatgtggtggtggac
aagccacgactggaccgagataatgattccgtcagtagcctgggatcggagtgcgtgggt
gaaaagcagaagatgtctcccactaacacatttctgtgtccgtcaccaacagctgccaat
gtagatatcaaagatgtgatggttctcaaagatctcattgaccatgcttctggccacagg
agaagtttcatgagtgttgttagcgtccaaccggaagctgtccgcgacaagctgatgaac
tatttgtgtctatggaactgctcgccaaacttcaaaaaactgcagtattttgtgagtctg
ttcatcatggacgccttcgtcgatctgttcattacactgtgtatcgtagtcaacactggc
ttcatggcgctggaccactgggacatgaacgaagacttgaagagtgtgtcagaatttgcc
aacacactgttcacgggtatatttgcggctgaggcgttcctaaagattcttgctctaagt
cctattaattacttcaaggacaactggaatgtgttcgacagtttcattgtgttcctcagt
ttaatggagcttatgctggaggaactcccagggttgtctgttctccgagccttcagattg
ctccgagttttcaagcttgccaaatcctggccgacgctgaacatgctgatcgctatcgtg
ggccggactatgggagctctgggtaacttgaccatcgtcctcggcatcgtcgtcttcatc
ttcgccgtcatggggcagcaactgttcagggattcgtaccagcgatacataaacgactcg
gacattggtggtggcatgcccagatggaacttcgatgacttccttcattccttcatgata
atattccgtgtgttgtgtggagagtggatcgagtccatgtggggctgtatgagagtcgct
ggctacccgtgtgtccccttcttccttcttacaatggtcatcgggaaccttgtggtgttg
aacctgtttcttgctctgttgctgagctcctttggcgccgaaagtcttcagagatcagaa
gcagatgacgagccaaacaaactggccgaggctgttgacagattcaagcgatttggggcc
tgggtgaaggtcaagatcatcgtctgcctcaaagtgaaactccggcgaaagacgaaacgt
cccgtgatcgcactgtcgccgagttcctcccgacccgagcttaatggcaaggaagctttg
gcagatggccagactgtagttggtaatggcaaagcctatgaacttcatcaaactcaagac
accgaaagcctttctcctaacaaaacagatgctgaaaagggtctcgacctacctgacggc
gagaaggtaggtgagacaactgcgttgcttccgcgcaggtgtagcgagggttctgtgaac
aaagactcgaagagtatgttaggttccgaggccagttctagctcaagctcactctccgaa
agcgagaaggatatcaaggtcgaagccgacggagagccggaaattaacgaagttgacatc
gtgtatgtgaaggaaccagacgactgtttgtgtaaggtgtgcacacggaagtttaaatgt
ctggcgaccattgaggaaagcaagacaggacagatatggtggaaattccgatgcttcatg
tttagagtgactgagcacaagtactttgaaaccttcatcatcacaatgattctagccagt
agctccgccttggccctggaggacgaataccttggcgaaaggccaattttgaaggccatc
cttatgtacttggacaaatgcttcactgcaatcttcatcctggagatgttggttaagtgg
gtggccttcggcttcaaaacctacttcacggatgcttggtgctggctggacttcatcatc
gtatcgctgtcgatcgtgctgcttgcggcagagtccttcaacctaggagacttggggtct
atcaaggcactccgaactctgagggccctacgtcccctccgtgcagtctctcggtgggag
ggtatgagggttgtggtaaacgctttgattaaagctataccctcgatcttcaacgtgcta
ctggtgtgcctggtattttggctgatctttggtatcatgggcgttcagctgtttgcgggc
agatttcataagtgtgtggatgcagatggcacgagacttaatatcagcgtcgtagatcac
cggaaccagtgcgagactcagaattatacttggaccaactcaaagattaattttgacaat
gtaatgaacgcctatcttgcccttttccaaattgctacctacaaaggttggaccgacatc
atgaatgatgccatagacagcagacagcccaactatcagccgctgtacgaagacaataga
tacatgtacatgtacttcgttctcttcatcatcttcggctccttcttcaccctcaacctc
ttcattggtgtcatcatcgacaactttaaccagcagaagaaaaagggtggttcgttggaa
atgttcatgacagatgatcaaaagaagtactacatggcaatgaagcgcatgcagtcaaag
tcaccgcaaaagtccataccaaaaccaaagctgtggattgccggtattatctttgacgtc
accacaaaccagatgtttgacatcggtatcatggtggtcatcttgctgaacatgataacg
atgatgattgagcatgaaggaatgactcatgagatcgacgaggcgctaaaatacatcaac
atcgtgtttattgcaatatttacattggagtgcgtgctgaaaattataggactgcgtcag
ttctactttaagatcccgtggaatgtatttgactttgttgttgtgattttatcaatttta
gctttgtcgttagcgggcttctttgagaacttcttcgtgtccccaacgttacttcgagtt
atccgggtgttcagagtgggtcgagtactacggttggttaagtccgccaagggcatccga
actcttctattctccctcgccgtgtcacttccggcgttgttcaacatcggtctgctgtta
gcgcttgtcatgtttatctatgccataatgggcatgaacttcttcatgaaggcggaggag
gaatacggcttggacgatgccttcaatttcaagacctttttccggagtttcattttattg
tttcaaatgtgcacttctgccggatgggacggtgtcctgaatggcttgatcgccaaatgt
aagccaaatgaaccctgcacacagtacacgatagctacaatgtacctagtgacatatcta
gtgattagtttcttggtcgtggtcaacatgtacatcgcggtcatattggagaactttagc
caggccactgaagacgtacagcagggtctcacgccggatgactttgacatgtattatgag
aaatgggagaagtacgaccccgatgctactcaatacatccaactggatatgctttcagac
ttcgtggatttcctggaggaaccgttacagttgcagaagccgaatcactttatgctagtt
aagttggatattccaatatgcgacggcgatatgtgtttctgtcgagacatattagatgcg
ttaacgaagaacttcctcgggacgacagaaacgccggatatgccgacgcaacaggaagcg
gaaacggaatatgtggtagttagcagtacattaaaaagacaaaaagagcattatgcagct
aaaataattcaaaaggcataccgtacattccggaggaagaaacatggaagcgaggacgac
gacgaggagaatgacattgacgaagattgcgtagacaacggagatgccgagactgtagtg
gttgagaccacctctagtcatgctagtgatacgacagaacagcaaaaaacagtggagctc
catgctgacagtgatatcgtggcgtga
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integrated database retrieval system
