Haliotis rufescens (red abalone): 124133708
Help
Entry
124133708 CDS
T07893
Name
(RefSeq) exosome complex component RRP45-like
KO
K03678
exosome complex component RRP45
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124133708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrf03019
]
124133708
Messenger RNA biogenesis [BR:
hrf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
124133708
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
124133708
NCBI-ProteinID:
XP_048244236
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MRETPLSSCEREFILKAITEHKRFDGRQAYDYRKVKISFGVDRGCCQVQLGDTRVLAQVS
CEITAPKPTRPTDGVLFVNVELSPMASPGFEIGRPSEFGVELTRLLERCLKESRCVDTES
LCVVAGEKVWAIRVDIHALNYEGNLLDAASVAAIAAIAHFRRPDVTVSGEEVTVHSPEER
DPVPLSVHHMPICCTFAFFTQGKHLLVDPSLVEEKVMDGKMVIGMNKHREICMLQITGEM
LLLKEQVLRCSNIAVVKVTEISELILKALENDRVARASGEKCGFAESVEPKKITTTKTDR
QDVDMEEDAADKMAEASHSSDDDMQIARPGDSSEVKVLDKGLAAIGEGGQNTWDMDDDAA
TEAVADAAAAATSSRLQGKGDNQHQVIDLDSGSEEETTVTLSHDDLQTHRPSTSPAQPAS
GKSEAKKGKKKKKK
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcgggaaacacctttatccagctgcgaaagagaattcattttgaaagcaatcaccgag
cacaagagatttgatggaaggcaagcatacgattacaggaaagtaaagatatcatttgga
gtcgaccgtggctgctgccaggtgcagttaggagatacgagggttttagctcaagtgtcg
tgtgaaatcacagcaccaaaacctacacggcctacagatggagttttatttgtcaatgtg
gagttgtctcccatggcatcaccgggctttgaaattgggaggccatccgagtttggtgta
gagctgacccgccttctggagcgatgcctgaaggaatcccgatgtgtggacacagagtct
ctgtgtgttgtggcaggggagaaggtgtgggccatccgtgttgacatccatgctctcaac
tatgaagggaacctgctagatgctgctagtgtggctgccattgctgccattgctcacttc
agacgtcccgacgtgacagtttcaggggaggaggtcacagtgcacagcccagaggagcga
gaccctgtacccctcagtgtccaccatatgcccatatgctgcacattcgccttcttcacg
caaggcaagcacctgttggtggacccaagcctggtggaagagaaggtgatggatggaaag
atggtgatagggatgaacaaacaccgggagatctgtatgctgcagattactggagaaatg
ctgctactcaaggaacaggtgttgaggtgttcaaatatagcagttgtcaaggtaacagaa
atatcagaactcatcctgaaggctctggagaatgacagagtagcaagggcatcgggtgag
aaatgtggctttgctgaatccgtggagccaaagaaaataaccactacaaagacagaccgg
caggatgttgacatggaggaagatgcagcagacaagatggcagaggcatcacacagtagt
gacgatgatatgcagattgccagaccaggggatagttctgaagtcaaagtcctggacaag
ggcctagctgctattggagagggaggtcagaatacgtgggacatggacgacgatgctgcg
acagaagccgtggcagatgctgctgctgctgcgacctcatcacgtctacagggcaaggga
gacaaccaacatcaagtcattgaccttgacagtggcagtgaagaggagacaactgtgacg
ctgagtcatgatgaccttcagactcacaggccctcaacgtcgccagcacaaccggcaagt
ggaaagtctgaggccaaaaagggaaagaagaagaaaaagaaataa
DBGET
integrated database retrieval system
