Haliotis rufescens (red abalone): 124140706
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Entry
124140706 CDS
T07893
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03018
RNA degradation
hrf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124140706
09123 Folding, sorting and degradation
03018 RNA degradation
124140706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrf03019
]
124140706
03041 Spliceosome [BR:
hrf03041
]
124140706
Messenger RNA biogenesis [BR:
hrf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124140706
mRNA degradation factors
5'-3' decay
Lsm complex
124140706
Spliceosome [BR:
hrf03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
124140706
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
124140706
NCBI-ProteinID:
XP_046364361
LinkDB
All DBs
Position
Unknown
AA seq
135 aa
AA seq
DB search
MLPLSLLRTAVNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDRFWRMPECY
IRGSTIKYLRIPDEVIDMVKEEVIQKNKGRGDMRGRGGQRGRGRGAFSAGGRGGRGGGRG
GGGGGQQKPGKGRGN
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgttacccttgtcactcctgagaactgctgtcaaccatccaatgctggttgagttgaag
aatggcgagacatacaacggacatcttgtcagctgtgataactggatgaacatcaacttg
agggaagttatctgcacatctcgggatggtgacagattctggaggatgccggagtgctac
atccgaggaagcacaatcaaatatcttagaattcctgatgaagtcattgacatggtgaag
gaagaggtcattcagaagaacaaaggtcgtggagacatgcgagggaggggaggtcagcgt
gggagggggagaggtgcattctcggctggaggtcggggaggtcgtggtggaggtcgagga
gggggaggtggaggtcagcagaagccaggcaagggccgcggcaactga
DBGET
integrated database retrieval system
