Haliotis rubra (blacklip abalone): 124266360
Help
Entry
124266360 CDS
T07967
Name
(RefSeq) exosome complex component RRP42-like isoform X1
KO
K12589
exosome complex component RRP42
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124266360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrj03019
]
124266360
Messenger RNA biogenesis [BR:
hrj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
124266360
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
124266360
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
124266360
NCBI-ProteinID:
XP_046557126
LinkDB
All DBs
Position
Unknown
AA seq
291 aa
AA seq
DB search
MVDVQLSEAEKTFILHGIQDNLREDGRSCEDYRHMEIETDVVSNTTGSARVRLANTDVLV
GVKAELSAPTPEKTDRGRLEFFVDCSANATPQFEGRGGEELATEISTMLSRAYDCSSCLD
LQSLCVIPKQQCWVLFVDILLLECGGNLFDAASIAVKAALFNTRIPSVTVSQEEGGEMEL
EISDDPYDVKRLDVATAPCVVTLNKIGHYHVVDASQKEEACTLARLLMGVTEKGSITALK
KEGCGSLDPESVLDMMETGKKIGQALNSSLMKVLEEEEKQGPRRKTVGFLR
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggttgacgttcaattaagtgaagcagagaagacttttattctccatggaatccaagac
aatctgcgtgaggatgggagaagctgtgaggactatcgtcacatggaaattgaaactgac
gtagtttcaaatacaacaggttcagccagagtgagactggcaaacacagatgtcctggtg
ggtgtgaaggcagaacttagtgctcccactcccgagaagacagacagaggccgacttgag
ttctttgtagactgttcagcgaatgctacccctcagtttgagggtcgaggaggggaagag
ttggcaactgaaatcagtacaatgttgtcccgagcctatgactgttccagctgtctcgac
ctgcagtctctgtgtgttatccccaagcaacagtgctgggtcttatttgtagatattctg
ttgttggaatgtggaggcaatctgtttgatgctgcgtccatagctgtcaaagctgctttg
ttcaatacaagaattccaagtgtgacagtcagtcaggaagaaggtggtgagatggaactg
gagatatcagacgatccgtatgacgtgaagcggcttgatgtcgccacagcgccctgtgta
gtaacactgaacaagattggtcactatcacgtggtagacgccagtcaaaaggaagaggca
tgcacccttgccagactgctgatgggagtcacagagaagggttcaatcacagcactgaag
aaagaagggtgtggcagtcttgaccctgagagtgtgcttgatatgatggagacagggaag
aagattggtcaggccttgaacagcagcctaatgaaggtccttgaggaagaagagaagcaa
ggccccagaaggaagactgtgggcttcctccgatag
DBGET
integrated database retrieval system
