Haliotis rubra (blacklip abalone): 124284342
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Entry
124284342 CDS
T07967
Name
(RefSeq) cys-loop ligand-gated ion channel-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124284342
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hrj04040
]
124284342
Ion channels [BR:
hrj04040
]
Ligand-gated channels
GABA-A
124284342
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Clc-like
YfhO
DUF6773
DUF5367
Motif
Other DBs
NCBI-GeneID:
124284342
NCBI-ProteinID:
XP_046576381
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MASVAYNFMTVDSNAHHRRYSNSGHDTGVSVDVLSETSSIPRSAKKRTRKKSSASVVQTN
HKKFYGFCSCCENRPLTCCVKVKVQVCVQFFKVGEIDTLKEQYTADVIVRARWREPSLDG
QIQSAGDIQDFQKYWNPKLYIENTIGDPKEILRHRLTFNNRGECFVSEKRIIKGTFMENL
ELDNFPFDVQDLTVTVASEFPSYEVEIVEDSENRHMVNRQSFVDEQEWHLYVHTECEKKA
IVIDQADNSVKRSAVSVKCRAARRPGYFVWNIFMVTFLICSLAFATFSVEKDLPQNRLQL
SFTLVLTAVAFKSVVNQSLPRISYLTYMDKYLLTSMVMLSTVCAWHGIVTTLLKDREHAD
KVEVIVLSVLVALYILYNAGFMLAIYVVPYKKRRIMAQKDREYKEGWQHRVKAKY
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgtggcctataactttatgacagtggattcaaacgcccaccaccgtcgttac
agcaactccggccatgataccggcgtgagcgttgacgttttaagcgagacgtcatcaata
ccaagatctgccaagaaacgaactcgtaagaagtcttctgcttctgttgttcaaaccaac
cacaagaagttctacggtttctgcagttgttgcgaaaatcgtcccctcacatgttgtgtc
aaggtgaaagtacaagtgtgcgtgcagtttttcaaagtcggcgagatcgacacactcaag
gaacaatacacagctgacgtcatcgtgcgggcaagatggcgggagccaagtttggatgga
caaattcagtcggcaggagacatccaggattttcagaagtactggaaccccaaactatac
atcgaaaacacgataggagaccctaaggagatcttgcggcaccgcctcacattcaacaac
aggggggaatgttttgtgtcggagaagagaatcatcaaggggacgttcatggagaacctg
gaactcgacaactttccatttgatgtacaggacttgactgttactgtggcatccgagttt
ccctcatacgaggtggagattgttgaagactctgagaacagacatatggtgaacagacaa
agcttcgtggacgagcaagagtggcatctatatgtgcacacggagtgtgagaagaaagcc
atagtcattgaccaagcggacaatagtgtaaagagatcggcagtttccgtcaagtgccga
gcagcaagacgacccggttactttgtatggaatatattcatggtgacgtttctcatctgc
agtctggcattcgccacatttagtgttgagaaggatctaccccagaaccggcttcagctg
tccttcacgcttgtcctcaccgccgtcgcgttcaagtcagtcgtcaatcagagtctaccg
cggatatcctatcttacatatatggataaatatttactaacgtcaatggtaatgctgtcg
acggtgtgtgcatggcacggtatcgtgacgacgttgttgaaggaccgtgagcacgccgac
aaggtggaggtgatcgtactgtctgtactggtggccctctacatcctctacaatgccggc
ttcatgctggcgatatatgtagtaccttacaagaaacgacgaataatggcccagaaggat
agggagtataaagaaggttggcaacatagagtgaaggcaaaatactag
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