KEGG   Haliotis rubra (blacklip abalone): 124291783
Entry
124291783         CDS       T07967                                 
Name
(RefSeq) intraflagellar transport protein 140 homolog
  KO
K19672  intraflagellar transport protein 140
Organism
hrj  Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:hrj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:hrj03037]
    124291783
Cilium and associated proteins [BR:hrj03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   124291783
SSDB
Motif
Pfam: TPR_IF140-IFT172 Beta-prop_IFT140_1st Beta-prop_IFT140_2nd TPR_IF140_C WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WD40_Prp19 Beta-prop_WDR19_1st ANAPC4_WD40 Beta-prop_EML WDR55 Beta-prop_HPS5 Beta-prop_WDR75_1st Beta-prop_RIG_2nd WD40 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR35_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR90_POC16_2nd TPR_COPA_B Beta-prop_TEP1_2nd TPR_IFT80_172 WD40_MABP1-WDR62_2nd NBCH_WD40 TPR_GEMI5 TPR_2 WDR90_beta-prop_4th Beta-prop_IFT122_1st Hira Beta-prop_IFT122_2nd TPR_19 RPN7
Other DBs
NCBI-GeneID: 124291783
NCBI-ProteinID: XP_046584813
LinkDB
Position
Unknown
AA seq 1490 aa
MAVYFDHRLETDQAGISTDLKWFSGTPLLAVTSYSDDNGGAVTFYTEEGEKLPNTHLQKN
CHVTSVSWHPNKKIVAVGWETGELLIWNEQERSLHEGVQMHKSPISVMHWSSNGTRIASG
DKSGVLIVWKVDTKGRLNPNPLCQHHIQEPLTHIIARPAPPPDPASDIASLARAAVSGDE
SALDMFNWKRGKSNSKTTASFGPSESLSFFVGGASGGVYYVNENGQCIQCFTVDSSVRKM
LYYDDKNILITITDNMMLTQHAVLLEGDTKEMIKVKLSGRNEEPIIIWAGKGLLATATGE
VAIRMWDLEQDDNYVLSLDGHSSYDSNESIMCVAYCAEKGMLAGGTNMGNVALWKFHPTN
NRKVEGEDKWKLQAPATVEGPVRQIQWGSNKTLMAINTIANVFVLSEQVMSSSYQDQTAV
VQYGPSSLSIEVFATGNHHDLKTDIQVKGVCTTKDVLAVWNGKRVIIYEYSADKLVLKAA
GSFTTEAQNVCLYEQNVYTIEGNKVQVRTFQGTIKQHMTFSEVEGNPCCINVCGNFLVVA
TEHGTLRVYDLSRREAKAHSNPKNIADSVHDFGTILSARCNCSGNRVSVMVKLQNNTFDS
KLYIWDVETDSVQYFNFQTGRGEQDDYPPPDGAEEENESDTNDAERGKNQAMKDIAGLTH
STSHYWDPHEPKLLVCEAMAVEQEKSREIKRKPSLSKAVEDGPVELMVVSLFCTPENGVL
IQDSFSLPPQVTALMGVEVPYHYFIKRPENTSSELASQQEGHVINPETGTAIYPKLVFRK
VLRDFVGLENSDKGTRDAMMNFSYYLTIGNMDEAFKAIKLIRSESVWENMAKMCVKSRRL
DVAYVCLGNMGHARGAKALREAHREAELDARVATLAIQLGLFEDAERLLKNCKRYDLLNE
FYQSGGQWGKALETAEMYDRIHLRTTYYNYARHLEENGNTSAAIPNFEKSETHRFEVPRM
LYEDPETLEQYIQRSKDKSLRKWWAQFMESNAEMDVALQFYEEAQDFFSLVRVYCFCGQI
DKAAEVCNETGDKAACYYLARQYENQDQIKEAIHFFTRSQAFGSAIRLCKEHGQEEQLLN
LALLGRPEDMMEAARYYEQHPRYNDKAVMLYHKAGNFSKALDLAFKTKQFGALQLISGDL
DERADPELLQQCADFFLENGQYDKAVDLLAIGKKYIDALKICMERHVEITEDLADKLTPE
KIEGENDTMDRLKILEGIADVCMHQGQYHIATKKFTQAGNKMKAMKALLKSGDTEKIVFF
AGVSRQREIYVMAANYLQSLDWRKDPEIMKSIIGFYTKGRALHLLAGFYDACAQVEIDEY
QNYDKALGALGEAYKCMSKAKVEDETLQEEKMAHLKHKITLIKKFVQARRVYEENSEEAM
KQCQVLLEETDLDSGVRVGDVLGFMIEHYARRERWKAAYSSLEELRSRLKGGNPAYYVNT
RTIEAIHRALDVPLSRTINPDKMNGFRSPEDEEGDFIEEDVADDSYSHNV
NT seq 4473 nt   +upstreamnt  +downstreamnt
atggcagtctactttgatcaccgtttggagacggaccaagccggcatcagtacagatcta
aaatggttcagtgggactccgctgttagcggttacatcctacagtgatgacaatggagga
gctgtcacattttacactgaggagggagaaaagttgcccaatacacatctccaaaagaac
tgccacgtgacatcagtgtcttggcatccaaacaagaagatagtggcagtgggatgggag
acgggagaactcctcatctggaatgaacaggagcgtagtctccatgaaggcgttcagatg
cataaatcacccatcagtgtcatgcattggagctctaatggtaccaggattgcatcagga
gataagtctggagtccttattgtatggaaagtggatacaaaaggccgcctgaatcccaac
cctctctgccagcatcacatccaggagccactcacacacatcatagctagaccagctcca
cccccagatccagcatcggacattgccagtttggcccgagcagctgtcagtggggacgag
agtgccttggacatgtttaactggaaacgagggaagagtaattcaaagacaacagcaagc
tttggcccatctgaatcactgtccttctttgttggtggagccagtggtggagtttactat
gtgaatgagaatggacaatgcatacagtgtttcacggttgactcgtcagtaaggaaaatg
ctgtattacgatgacaagaacatcctcatcacaatcacagacaacatgatgcttacacaa
catgctgtccttcttgagggagacaccaaagaaatgatcaaggtaaagctgagtgggagg
aatgaggaaccgatcatcatctgggcagggaaaggcttgttggctacggcaactggagaa
gtggccattagaatgtgggatctggagcaggatgacaactatgtgttgagtctggacggt
cacagcagctacgacagcaatgaatccatcatgtgtgtagcatactgtgctgagaaaggc
atgttggctggaggcactaatatggggaatgtggcgttgtggaaatttcatccgaccaac
aaccgtaaggtggagggagaggacaagtggaagctgcaggcaccggcaacagtggagggg
ccagtcagacagatacagtggggcagcaacaagacactgatggccatcaacactatcgcc
aacgtgtttgtcctcagtgagcaggtgatgagctccagctaccaggaccagacagctgtg
gttcagtacggacccagctcactgtccatcgaggtgttcgctactgggaaccaccatgac
ctcaagaccgacatccaggtcaagggggtctgtacaactaaggatgtccttgctgtatgg
aatggaaaacgggtcatcatctatgaatattcagctgacaaactagtcctaaaggctgca
ggttcgttcaccacagaggcacagaatgtctgcctatatgaacaaaatgtgtatacaatt
gaaggaaacaaagtgcaagtcagaacattccagggaacaatcaaacagcacatgacattt
tctgaagtggagggcaacccctgctgcatcaatgtctgtggcaacttcctggttgtagcc
acagaacatggaacactccgagtctatgacctctctcgcagggaagcgaaagcccacagt
aatccaaagaacatagctgattctgtccatgacttcggcaccattctctcagcccggtgc
aactgttccggcaacagagtgagtgtgatggtgaagctgcagaataacacctttgacagc
aagttgtacatctgggatgtagagacagacagtgtgcagtacttcaacttccagacagga
cgtggggagcaggatgactacccccctcctgacggtgcagaggaggagaatgaatccgat
accaatgatgcagaaaggggtaagaaccaggccatgaaggacatcgctgggcttacgcac
tcgacatctcactactgggatccccatgagcccaagctgctggtgtgtgaggccatggcg
gtcgagcaggagaagagcagggagatcaagaggaagccatctctctctaaagctgttgaa
gatggcccggtggaactcatggtggtgtctctcttctgcacaccagagaatggtgtcctc
attcaagacagcttcagtctccccccacaagtcactgctctcatgggggtggaagttcca
tatcactatttcatcaagaggccggagaacacatcgtccgagcttgccagtcagcaggaa
ggtcatgtgatcaacccagagactgggactgccatctaccccaaactggtgttcaggaaa
gttctgcgtgattttgtggggctggagaacagtgacaaaggcacgagagacgccatgatg
aatttcagctactatcttacaataggcaacatggatgaggcatttaaagccatcaagctt
atcaggagtgagtcagtgtgggagaacatggccaagatgtgtgtgaagagtcgacggctg
gatgtggcgtacgtgtgtctgggtaacatgggccatgcacgtggagccaaggcactgcgg
gaagcacatagagaagctgaactagatgccagggtggccacattagccatacaactagga
ttgtttgaagatgcagagaggttactgaagaactgtaagcgttacgatctgctgaatgag
ttctaccagagtggtgggcagtggggaaaggccctggagacggccgagatgtatgacaga
atccacctcaggaccacatactacaactatgctcggcatctggaggagaatggaaacaca
tcagcagccattccaaactttgagaagtccgagacacacaggtttgaggtaccgaggatg
ctgtatgaagaccctgaaaccctggaacagtacatccagaggagcaaagacaagtccctg
cgtaaatggtgggcccagtttatggagagcaatgcagaaatggatgtggcattacagttc
tacgaggaggcccaggacttcttctcccttgtccgagtctactgcttctgcggacagatt
gacaaggcagcagaggtgtgtaacgagaccggagacaaggcagcctgctactatctggct
cgtcagtatgaaaaccaggaccagatcaaagaggccatccacttctttaccaggtcacag
gcctttggtagtgctatccgcttgtgtaaggagcatggtcaggaggagcaactgctgaac
ctggccctgctgggtcgaccggaggacatgatggaggccgctcgctactacgaacaacac
ccacgctacaatgacaaggctgtcatgctgtatcacaaggctggcaacttttctaaggct
ctggatcttgccttcaagacgaagcagtttggggctttacagttgatatccggtgatctt
gatgagagagctgaccctgagctgcttcagcagtgtgcggacttcttcctggagaacggg
cagtatgataaggctgtggaccttttggctatagggaagaagtacatcgatgctctgaag
atctgtatggagcgacatgtggagattaccgaggatctggcagataaactgacaccagag
aaaatcgagggtgagaacgacacgatggaccgactgaagatcctagaaggtattgctgac
gtgtgcatgcaccagggacagtaccacatagccaccaagaagttcacccaggctggcaac
aagatgaaggctatgaaagcactgttgaagtccggtgacactgagaagattgtgttcttt
gctggtgtgtcccgtcagcgggaaatctatgtgatggcagctaactatcttcagtctctt
gactggaggaaggatcccgagatcatgaagagtatcataggattttacacgaagggccgg
gcactccacctgttggcaggattctacgatgcatgtgctcaggtggagattgatgagtat
cagaactacgacaaggctctgggggctctaggggaggcctacaagtgcatgagtaaagcc
aaggtggaggatgagactttgcaggaggagaaaatggctcacctcaaacacaagatcaca
cttatcaagaagtttgtgcaagctcggagggtgtacgaggagaactctgaagaagccatg
aaacagtgccaggtgttgctggaagagacggatctcgacagtggggtccgtgttggggat
gtcctcggcttcatgattgaacactatgcccggagagagagatggaaggcggcatactca
agtcttgaagaattgcgaagtagattaaagggaggtaaccccgcatactatgttaacaca
agaacaatagaggcaattcatcgagcactcgatgttccactgtcacggaccattaatcct
gacaagatgaatggcttccgtagcccagaagatgaggagggagacttcattgaggaagat
gttgctgatgactcgtacagccacaacgtatga

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