Helobdella robusta: HELRODRAFT_140459
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Entry
HELRODRAFT_140459 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K23720
UV-stimulated scaffold protein A
Organism
hro
Helobdella robusta
Pathway
hro03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HELRODRAFT_140459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hro03400
]
HELRODRAFT_140459
DNA repair and recombination proteins [BR:
hro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
HELRODRAFT_140459
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
Motif
Other DBs
NCBI-GeneID:
20196559
NCBI-ProteinID:
XP_009019331
JGI:
Helro1_140459
UniProt:
V3UWN9
T1EJ09
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
LLKLIEEMTKSGKPKLDESKCKHFKNLCKASNENVRRSFCFLWSQLEKNHSEVRRSSVQL
IDILFMRSAIFRDLLLNNMQEFVELTLGTNHKRSLPLPHSSAWDMKQQTICYLKNWHDTF
GKGYRKLDLAVKYLKNCKNINFDDVSNNVHNEAENERLTLIRQAKINATSNELNDIKPEI
SSCLIEIENCLSLLMPCPEQFDIYNRGDTSKSNQNENHSFDNHDSSSNYDYESDGNDKHE
FRRHGLFSDNISLAININVNSQIFIDKTEDNSDILTSFYEKVMLLKQKYLNLLQRYLKVF
TKCGASANLFKPALDLKMDIEKVLQKAEKIVVKNDLTKTNDLASDEESNFDDFIEKAPII
PYGIDLYHWGDSEKDLLPLKPSTSQMNWWVTRDEEEQVDKEALTSMKERVINFAGFFEPV
KWKCRAPLSNGKLCIRMDRKKCPFHGVIIPRDKMGKPNDPNNCPSTSSTIHQKSESELNG
RLAENSWRDPELEADISAAIGIDITFRPKNKGKNKNTKKTGLTDLKSLKYNTPLKRLEKK
LFNKAAMKRVASTMDNIDAKRLRDKFGNNFNYA
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
ttgttaaagttgatcgaagaaatgacgaaaagcggcaagccaaaacttgatgaatcgaaa
tgtaaacattttaaaaatttgtgtaaagcatccaatgagaatgtaagaagatcattttgc
ttcctgtggtcacaattggaaaaaaatcattcagaagttagaagatcgtcggttcagtta
attgacatacttttcatgaggtctgctatatttagagaccttttattgaacaacatgcaa
gagttcgtggagttgactcttgggactaaccacaaacggtctctcccactgccacactct
tctgcttgggacatgaagcagcaaacaatttgttatttgaaaaattggcatgatacattt
ggcaaaggctacagaaaactagatttagctgtaaagtacttaaaaaattgtaaaaacatt
aattttgatgatgtttcaaataatgtccataacgaagcggaaaacgagaggctgacatta
attagacaagctaaaataaatgcgacctcaaatgaactcaatgatataaaacctgaaata
agttcatgtctcatagaaattgaaaattgtcttagcttgttaatgccatgtccagaacaa
tttgatatatataacagaggtgatacttcaaaatcaaatcaaaatgaaaaccatagtttt
gataatcatgatagtagtagcaattatgattatgaatcagatggaaatgacaagcatgag
ttcagaagacatggcttattttctgataatatttccttggctataaatattaatgtaaat
tctcaaatttttattgataaaacagaggataattctgatattttgacatcattttatgaa
aaggttatgcttcttaaacagaaatatctaaatctactacaaaggtatttaaaggttttt
actaagtgcggggcttcagctaatcttttcaaacctgctttagacctcaaaatggatata
gaaaaagtgttgcaaaaagctgaaaagatagttgtaaaaaatgatttgacaaaaactaat
gatctggctagtgatgaagaaagtaattttgatgatttcattgagaaggctcctatcatt
ccatatggtatagatttgtatcactggggagattctgagaaagacctgctgcctctgaag
ccatctacatctcagatgaactggtgggtgactcgtgacgaagaagaacaggtagataaa
gaagcactgacatcaatgaaagaaagagttattaactttgctggattttttgaaccagtt
aaatggaaatgtagagctcccctttcaaatggaaagttatgcattagaatggaccgtaag
aagtgtccttttcatggtgtcatcattccaagagataaaatgggtaaaccaaacgatcct
aacaattgtccaagtacaagttccaccattcatcaaaaatctgaaagtgaattaaatgga
cgactagcggaaaatagttggagggatcctgaattggaagcagatatatcagctgctatt
gggattgatataacatttcgtcctaaaaataaaggaaaaaataagaacacaaaaaaaact
ggtttgactgatttgaaatctttgaaatacaacacacctctcaagagattggagaaaaaa
cttttcaacaaagctgcaatgaaacgggttgcaagcactatggacaacattgatgctaag
agattgagagacaaatttggaaataacttcaactatgct
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