Helobdella robusta: HELRODRAFT_193870
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Entry
HELRODRAFT_193870 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K08770
ubiquitin C
Organism
hro
Helobdella robusta
Pathway
hro04120
Ubiquitin mediated proteolysis
hro04137
Mitophagy - animal
hro04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
HELRODRAFT_193870
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
HELRODRAFT_193870
04137 Mitophagy - animal
HELRODRAFT_193870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hro04121
]
HELRODRAFT_193870
Ubiquitin system [BR:
hro04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
HELRODRAFT_193870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
20212802
NCBI-ProteinID:
XP_009027975
JGI:
Helro1_193870
UniProt:
T1FVF6
LinkDB
All DBs
Position
Unknown
AA seq
841 aa
AA seq
DB search
MASEMQIFVKTLTGKTITLEVEPSDSIENVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTID
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS
DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF
VKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
STLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGK
QLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQD
KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
VEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
E
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagagatgcaaattttcgtaaagacgcttaccggcaagactatcaccttagag
gtggagccgagtgattccattgagaatgtgaaaaacaagattcaagacaaagagggtatc
cccccggatcaacagcgtttaatttttgctggcaagcagctggaagatggcagaaccctc
agtgactacaatatccagaaagaatctacacttcatttggtcctcagattgcgtgggggt
atgcaaattttcgtaaaaaccttgaccggaaaaacaataacactggaagttgagcccagt
gacactattgacaatgtcaaggccaagatccaagataaggaaggtattcctccagatcaa
caacgcttgatttttgctggcaaacagttagaggatggcagaacccttagtgattacaac
atccaaaaggaatcaacacttcatttggttctcagattacgtggtggtatgcaaattttt
gttaaaacattgactggcaaaacaattactctggaagttgaaccaagtgataccattgac
aatgtcaaagcaaaaattcaagataaagaaggtattccaccagatcagcaaagactgatt
tttgctggcaagcagttggaggatggtagaacattgagtgattacaatattcagaaggag
tcaacacttcatttggttctcagactgcgtggtggcatgcagattttcgtcaaaacactt
actgggaagacaattacattggaagtagagccaagtgacactatagacaatgtgaaagcc
aaaatccaagataaggaaggtattccaccagatcaacaacgtttaatttttgctggcaaa
caattggaagatggcagaaccctcagtgactacaacatccaaaaggaatcaacacttcac
ttggttctcaggttgcgtggtggtatgcaaatttttgtcaaaaccttgactggcaaaaca
atcacactcgaagttgaacccagtgataccatagataatgtcaaagcaaaaattcaagat
aaagagggtattccaccagaccaacagcgtctgatttttgctggtaaacagttagaagat
ggtagaaccctcagtgattacaacatccaaaaggaatcaacccttcacttggttctcaga
ttgcgtggtggcatgcagatttttgtcaaaaccttgacagggaagactattacactcgaa
gttgaaccaagcgacaccattgacaatgtgaaggcaaaaatccaggataaagaaggcatt
cctcctgatcaacagcgtctgatttttgctggcaagcagttagaagatggtagaaccctc
agtgattacaacatccagaaagaatcaacacttcatttggttctcagattgcgaggtggt
atgcagatttttgtcaaaactttgactgggaaaacaattacacttgaagttgaacccagt
gacaccattgataatgtcaaggccaagatccaagataaggaaggtattcctccagatcag
caacgtttgatttttgctggtaaacagttagaagatggtagaacactcagtgattacaac
atccagaaagaatcaacccttcacttggttctcagattgcgtggtggtatgcagattttt
gtcaaaaccttgacagggaagactattacactcgaagttgaaccaagcgacactatcgac
aatgtgaaggcaaaaatccaggataaagaaggcattcctcctgatcagcaacgtttgatt
tttgctggcaagcagttggaagatggtagaaccctcagtgattacaacatccaaaaggaa
tcaacccttcacttggttctcagattgcgtggtggtatgcagatttttgtcaaaaccttg
actgggaagactattacactagaagttgaaccaagcgacactatcgacaatgtgaaggca
aaaatccaggataaagaaggcattcctcctgatcagcaacgtctgatttttgctggcaag
cagttagaagatggtagaaccctcagtgattacaacatccaaaaggaatcaacccttcac
ttggttctcagattgcgtggtggcatgcagatttttgtcaaaaccttgactgggaagact
attacactagaagttgaaccaagcgacaccattgacaatgtgaaggcaaaaatccaggat
aaagaaggcattcctcctgatcagcaacgtttgatttttgctggtaaacagttagaagat
ggtagaacactcagtgattacaacatccaaaaagaatcaacccttcacttggttctcaga
ttgcgtggtggtatgcagatttttgtcaagaccttgactggaaaaacgatcactttggaa
gttgaacccagtgacaccattgacaatgtgaaggcgaaaatccaggacaaagaaggtatt
ccaccagatcaacagcgtctgatttttgctggcaagcagttggaagatggcagaaccctc
agtgattacaacatccagaaggaatcaactcttcaccttgtcttaagactgcgcggtggt
gaatag
DBGET
integrated database retrieval system
