Helobdella robusta: HELRODRAFT_63393
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Entry
HELRODRAFT_63393 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hro04040
]
HELRODRAFT_63393
Ion channels [BR:
hro04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
HELRODRAFT_63393
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_3
Ank
Ank_4
Ank_5
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
20213500
NCBI-ProteinID:
XP_009009132
JGI:
Helro1_63393
UniProt:
T1FXF2
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MDSSNDKHLNHLEKVLLCAVEKGDKHLVVRCLHAEKPVDINCSDFLGRSPIQIAVEKRNI
SLIKILLEQDGIQIGNTLLYAICEGTYEIVEMLIDHHSVTADMIGSDWGFNMKNDFNISD
EFFPEISPIVLAAHCNHFEIIQLLISRGATINKPHPLSCSCSKCRKETFEDSLRYSLQRI
QIFRALSSPAWISLTSFDPVLTAFRLSWELEHLAMKENEFRDLYANLSEQCKQYACNLLD
QCRSSHEVIAVLNKSVDSAYDKWTTEWSDINKLTLDRLKLALKYRQKQFVAHPHCQQLLA
SVWFEGIPGWRRRNFITKVVIIITLICFLPIMALIYLVFPRSRIGRLVRTPFMKFMYHSV
SFGVFLFLLILVSTNFGAADGEYTQRQHQRGPPPTNLECLIVAYVMGFVWGECKQLWDEG
LKAYLRQWWNWLDFIMLSLYLCTLSLRLIAYFHSQHPDIYGLSLAPRNQWPETDPTFVSE
GVFAIANVFSFARIIYLFQANPLLGPLQISLGCMLIDIGKFFFIFFLVITSFACGLNQLY
YFYSSSNSSHEIETNHQMTSQEMQNTNYENAFNPSYVTLFWSLFGLTQLQTVRDGQLKAI
TKAVGECLLMFYHTMAVIVLINMLIAMMSNSYREIEDHADREWKFARTKLWMGYFDDGST
LPPPFNILISPKSIYYFLRSIKLLVYKILYCCHIKPSTKKMMRKSMKSKEKLLEDNRRQY
TVRSIYLKNGLTTMLTLMCMYLFKILFVIYQQDVMRKLVNRFIHQWKIQLRQESINEDHI
SEIKQDISSLRRELQNDFKKDEFQSSFMFEKIKKDIARLARRNSNPPFKSEAAFTSSTKK
KSKSMERRFDSTTDNDILPRKFSGTYNNFNSYPLADDEMKNKNAIISYELDYLQQIQKQH
GNSSPGYKQQNKTECDVNLLKNQIIGSLEAEVGKIITNALSPVIDYLKRHTSEASSLHLQ
FLKLVRK
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggattcgtcaaacgataaacatctgaaccacctggaaaaagttctgctgtgtgctgtt
gagaagggagataaacatctcgtcgtgagatgtctgcatgctgaaaaaccggttgacatc
aactgttctgattttcttggaagatcaccgatacaaatagctgtcgagaaaagaaacatt
tcattaataaaaattcttctagaacaagatggaatacaaataggaaacacattgctctac
gcaatttgtgaaggcacgtacgaaattgtggaaatgctgattgaccatcattctgtcacg
gcggacatgattggctccgactggggcttcaacatgaagaatgatttcaatatttctgac
gagttttttcctgaaatttcaccaatcgttttggcagctcactgcaatcatttcgaaatc
attcaattgttaatctctcgtggggccacaataaacaagccccatcctctttcgtgctcc
tgcagcaagtgcagaaaagaaacatttgaagatagcttaagatattcattacaacgtatt
caaatattcagagcgctgtccagtccggcctggatatcactgacaagtttcgatcctgtt
ttaactgcttttcgactttcatgggaattggagcacttggctatgaaagaaaatgaattt
agagatttgtacgctaatttgagtgaacaatgcaaacaatatgcttgcaatttgttggat
caatgtaggagcagtcacgaggttattgctgtcttaaacaaatctgttgattctgcgtac
gacaaatggacaacggaatggagtgacattaacaaactgactttggataggttgaagtta
gcgttaaaatatagacaaaaacagtttgttgcccatcctcattgccaacaattgctggcc
tcagtgtggtttgaaggaatccctggatggcgaagaaggaattttattacaaaagttgtc
attattataactctcatatgctttcttccaattatggcgttgatctatctggtgtttcca
agaagtagaatcggccgcttagttcgaactccttttatgaaattcatgtatcacagtgtg
tcttttggagtttttttgtttcttctcattttggtttccacaaattttggtgcagctgac
ggagaatacactcaaagacaacatcaaagaggtccgccgcctactaacttggaatgtctt
attgttgcatacgtcatgggttttgtctggggagaatgcaagcagttgtgggacgaaggt
ctgaaagcttatcttcgccaatggtggaactggctcgatttcattatgctttcattgtat
ttgtgcaccttgtccttgcgtttaattgcttactttcactctcagcaccccgatatttac
ggtttgagtttagctcctcgaaatcaatggcctgaaacagatccaacttttgtttcagaa
ggagtttttgcaattgccaatgttttcagctttgcgagaataatttatctctttcaagct
aacccattgcttggaccactccaaatttctttaggatgcatgctgattgatataggaaaa
ttttttttcatttttttcctggttataacttcatttgcttgtggtttgaatcaactctac
tacttttattcctcttctaattcatctcacgagatagaaacaaatcatcaaatgacttcg
caagaaatgcagaacacaaattatgaaaacgcgtttaatccgagctatgtgacgctcttt
tggtctctctttggtctgacccaattgcaaacagtaagagacggacagctaaaagctatt
acgaaagcagttggcgaatgtttgttgatgttttatcatacaatggcggtaattgttttg
attaatatgctcatagctatgatgtcaaattcttacagagaaattgaggaccatgctgac
agagaatggaaatttgcgagaacgaaattgtggatgggatattttgatgatggctcaacg
ctaccccctcccttcaacatattaatcagtcctaaatcaatttattatttcttaagaagt
atcaagttgttggtgtataaaatactctattgctgtcacattaaacctagtacaaaaaaa
atgatgagaaaaagcatgaagtctaaggaaaagttactggaagacaacaggagacaatat
accgtaagatctatatatttaaaaaacggtttaacgacaatgcttacgcttatgtgtatg
tatttatttaaaatactatttgtcatttaccaacaggatgttatgcgcaaattggtcaac
agatttatacatcagtggaaaattcaactgagacaagagagcatcaacgaagatcacatt
tccgaaatcaaacaagacatctccagtttgaggcgcgagttgcaaaacgatttcaaaaaa
gacgagttccagtcaagcttcatgtttgaaaaaataaaaaaagatatcgctcggctggca
cggcgtaactccaatcctccatttaaatctgaagctgcattcacttcatcaactaaaaaa
aagagcaaaagtatggaaagacgttttgattcaaccacggacaatgacatcttacctaga
aagttttctggaacatacaacaattttaacagctaccctttggccgatgatgaaatgaaa
aataaaaatgcaataatttcttacgaattagattatttacaacaaattcaaaagcaacac
gggaattcgtctcccggttataaacagcaaaacaaaaccgaatgcgacgtaaatttgtta
aaaaaccaaattataggaagtttggaagcggaggttggaaaaataataacaaatgcttta
tcgcctgtcatcgattacttgaaacggcacacctcggaagcaagcagtctacacttgcaa
ttcttaaaactcgtaagaaaatga
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