Helobdella robusta: HELRODRAFT_88777
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Entry
HELRODRAFT_88777 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K12590
exosome complex component RRP46
Organism
hro
Helobdella robusta
Pathway
hro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HELRODRAFT_88777
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hro03019
]
HELRODRAFT_88777
Messenger RNA biogenesis [BR:
hro03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
HELRODRAFT_88777
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
20216909
NCBI-ProteinID:
XP_009028437
JGI:
Helro1_88777
UniProt:
T1G762
LinkDB
All DBs
Position
Unknown
AA seq
211 aa
AA seq
DB search
MLEIRKSSCRLAFLSKSDGSVKLKHGQTSVVAAVNGPLDVKIIKEQVDKMNVDIIFKYKT
ESKAKNQRTMEKLIQQICECSVLVKNFPRTNLTIALQELEDDGSLLACCINATCLALLDA
CIPMKQLFAAVSVCFNKVDDTITIDPTLSQESQYPGVTFVFNNGKFNVIAMHSNSFLSKE
VLNKSLLQAREHAKLMFDSYRDLIKQSHQIV
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaaattcgtaaatctagttgccggcttgcctttttatcaaaatctgatggatcc
gtgaagctgaagcatggtcagacgtcagtggttgcggccgtgaacggacctctagatgtc
aaaataataaaagaacaagttgataaaatgaacgttgatatcattttcaaatataaaact
gaatcaaaagcaaaaaatcaaagaacgatggagaaattgatacaacagatatgtgagtgt
tcggttctagtaaaaaattttccaagaacaaatttgacaattgcactgcaagagttagaa
gatgatggttctttgttggcttgttgtatcaatgctacctgcttagctttattggacgcc
tgcatacctatgaaacaactttttgcagctgtgagtgtgtgtttcaataaagtcgatgac
acgatcacaatagatcccactttaagccaagagtcacaatatccaggcgtcacttttgtc
ttcaataatgggaagtttaatgtaattgcgatgcattcaaactcatttctttcaaaagaa
gttttaaacaagagtctacttcaggccagagaacatgccaagctgatgtttgattcatac
agggacctcatcaaacagtcccaccagattgtataa
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